Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21■□□□□ 0.95
Usb1Q91W78 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21■□□□□ 0.95
Usb1Q91W78 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
Usb1Q91W78 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Usb1Q91W78 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usb1Q91W78 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21■□□□□ 0.95
Usb1Q91W78 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Usb1Q91W78 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usb1Q91W78 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usb1Q91W78 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Usb1Q91W78 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Usb1Q91W78 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usb1Q91W78 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.99■□□□□ 0.95
Usb1Q91W78 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Usb1Q91W78 Gm45444-201ENSMUST00000211394 898 ntBASIC20.99■□□□□ 0.95
Usb1Q91W78 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usb1Q91W78 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Usb1Q91W78 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usb1Q91W78 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usb1Q91W78 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usb1Q91W78 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usb1Q91W78 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usb1Q91W78 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usb1Q91W78 Gm43566-201ENSMUST00000196851 808 ntBASIC20.98■□□□□ 0.95
Usb1Q91W78 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usb1Q91W78 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usb1Q91W78 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usb1Q91W78 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.98■□□□□ 0.95
Usb1Q91W78 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usb1Q91W78 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usb1Q91W78 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usb1Q91W78 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Usb1Q91W78 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usb1Q91W78 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usb1Q91W78 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usb1Q91W78 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usb1Q91W78 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.96■□□□□ 0.95
Usb1Q91W78 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usb1Q91W78 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Usb1Q91W78 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usb1Q91W78 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.96■□□□□ 0.95
Usb1Q91W78 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usb1Q91W78 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usb1Q91W78 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Usb1Q91W78 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
Usb1Q91W78 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Usb1Q91W78 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Usb1Q91W78 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Usb1Q91W78 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usb1Q91W78 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usb1Q91W78 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usb1Q91W78 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.94■□□□□ 0.94
Usb1Q91W78 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usb1Q91W78 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usb1Q91W78 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usb1Q91W78 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Usb1Q91W78 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.94■□□□□ 0.94
Usb1Q91W78 Notumos-201ENSMUST00000151998 2659 ntBASIC20.93■□□□□ 0.94
Usb1Q91W78 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Usb1Q91W78 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.92■□□□□ 0.94
Usb1Q91W78 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Usb1Q91W78 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.92■□□□□ 0.94
Usb1Q91W78 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usb1Q91W78 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Usb1Q91W78 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usb1Q91W78 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usb1Q91W78 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usb1Q91W78 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Usb1Q91W78 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usb1Q91W78 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usb1Q91W78 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Usb1Q91W78 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usb1Q91W78 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usb1Q91W78 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.91■□□□□ 0.94
Usb1Q91W78 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Usb1Q91W78 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.91■□□□□ 0.94
Usb1Q91W78 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usb1Q91W78 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usb1Q91W78 Gm15546-201ENSMUST00000122095 826 ntBASIC20.9■□□□□ 0.94
Usb1Q91W78 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.9■□□□□ 0.94
Usb1Q91W78 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usb1Q91W78 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Usb1Q91W78 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Usb1Q91W78 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Usb1Q91W78 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.89■□□□□ 0.93
Usb1Q91W78 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Usb1Q91W78 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usb1Q91W78 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usb1Q91W78 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usb1Q91W78 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Usb1Q91W78 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.88■□□□□ 0.93
Usb1Q91W78 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.88■□□□□ 0.93
Usb1Q91W78 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usb1Q91W78 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Usb1Q91W78 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usb1Q91W78 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usb1Q91W78 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usb1Q91W78 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usb1Q91W78 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usb1Q91W78 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms