Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx41Q91VN6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC24.38■■□□□ 1.49
Ddx41Q91VN6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx41Q91VN6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx41Q91VN6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.38■■□□□ 1.49
Ddx41Q91VN6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx41Q91VN6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC24.38■■□□□ 1.49
Ddx41Q91VN6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx41Q91VN6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx41Q91VN6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx41Q91VN6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx41Q91VN6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx41Q91VN6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx41Q91VN6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx41Q91VN6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.36■■□□□ 1.49
Ddx41Q91VN6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Ddx41Q91VN6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx41Q91VN6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Ddx41Q91VN6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx41Q91VN6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx41Q91VN6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.35■■□□□ 1.49
Ddx41Q91VN6 Gm26766-202ENSMUST00000227544 2347 ntBASIC24.35■■□□□ 1.49
Ddx41Q91VN6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx41Q91VN6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.34■■□□□ 1.49
Ddx41Q91VN6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx41Q91VN6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Ddx41Q91VN6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx41Q91VN6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.34■■□□□ 1.49
Ddx41Q91VN6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx41Q91VN6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx41Q91VN6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx41Q91VN6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx41Q91VN6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx41Q91VN6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
Ddx41Q91VN6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.33■■□□□ 1.49
Ddx41Q91VN6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx41Q91VN6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx41Q91VN6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx41Q91VN6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx41Q91VN6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx41Q91VN6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
Ddx41Q91VN6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx41Q91VN6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx41Q91VN6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx41Q91VN6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx41Q91VN6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx41Q91VN6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx41Q91VN6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx41Q91VN6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx41Q91VN6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx41Q91VN6 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.3■■□□□ 1.48
Ddx41Q91VN6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC24.3■■□□□ 1.48
Ddx41Q91VN6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx41Q91VN6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.3■■□□□ 1.48
Ddx41Q91VN6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Ddx41Q91VN6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx41Q91VN6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.29■■□□□ 1.48
Ddx41Q91VN6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Ddx41Q91VN6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC24.29■■□□□ 1.48
Ddx41Q91VN6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Ddx41Q91VN6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx41Q91VN6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx41Q91VN6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Ddx41Q91VN6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ddx41Q91VN6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
Ddx41Q91VN6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ddx41Q91VN6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ddx41Q91VN6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx41Q91VN6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.27■■□□□ 1.48
Ddx41Q91VN6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
Ddx41Q91VN6 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.27■■□□□ 1.48
Ddx41Q91VN6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.27■■□□□ 1.48
Ddx41Q91VN6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx41Q91VN6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.26■■□□□ 1.47
Ddx41Q91VN6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx41Q91VN6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx41Q91VN6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx41Q91VN6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx41Q91VN6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx41Q91VN6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.25■■□□□ 1.47
Ddx41Q91VN6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx41Q91VN6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx41Q91VN6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx41Q91VN6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx41Q91VN6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx41Q91VN6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx41Q91VN6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx41Q91VN6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx41Q91VN6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx41Q91VN6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx41Q91VN6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx41Q91VN6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx41Q91VN6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.23■■□□□ 1.47
Ddx41Q91VN6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx41Q91VN6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.23■■□□□ 1.47
Ddx41Q91VN6 Etf1-202ENSMUST00000180351 108 ntBASIC24.23■■□□□ 1.47
Ddx41Q91VN6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.23■■□□□ 1.47
Ddx41Q91VN6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx41Q91VN6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx41Q91VN6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 109.2 ms