Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps4aQ8VEJ9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps4aQ8VEJ9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Vps4aQ8VEJ9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps4aQ8VEJ9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps4aQ8VEJ9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps4aQ8VEJ9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Vps4aQ8VEJ9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps4aQ8VEJ9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps4aQ8VEJ9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.48■□□□□ 0.87
Vps4aQ8VEJ9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.48■□□□□ 0.87
Vps4aQ8VEJ9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps4aQ8VEJ9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps4aQ8VEJ9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps4aQ8VEJ9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps4aQ8VEJ9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.47■□□□□ 0.87
Vps4aQ8VEJ9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps4aQ8VEJ9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.47■□□□□ 0.87
Vps4aQ8VEJ9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4aQ8VEJ9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4aQ8VEJ9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4aQ8VEJ9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4aQ8VEJ9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4aQ8VEJ9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.46■□□□□ 0.87
Vps4aQ8VEJ9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.46■□□□□ 0.87
Vps4aQ8VEJ9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4aQ8VEJ9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Vps4aQ8VEJ9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.46■□□□□ 0.87
Vps4aQ8VEJ9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4aQ8VEJ9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Vps4aQ8VEJ9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps4aQ8VEJ9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4aQ8VEJ9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4aQ8VEJ9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.45■□□□□ 0.86
Vps4aQ8VEJ9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.45■□□□□ 0.86
Vps4aQ8VEJ9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4aQ8VEJ9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4aQ8VEJ9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4aQ8VEJ9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4aQ8VEJ9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4aQ8VEJ9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps4aQ8VEJ9 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.45■□□□□ 0.86
Vps4aQ8VEJ9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.44■□□□□ 0.86
Vps4aQ8VEJ9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps4aQ8VEJ9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Vps4aQ8VEJ9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps4aQ8VEJ9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps4aQ8VEJ9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps4aQ8VEJ9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps4aQ8VEJ9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps4aQ8VEJ9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps4aQ8VEJ9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Vps4aQ8VEJ9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Vps4aQ8VEJ9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Vps4aQ8VEJ9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Vps4aQ8VEJ9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.43■□□□□ 0.86
Vps4aQ8VEJ9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps4aQ8VEJ9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Vps4aQ8VEJ9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps4aQ8VEJ9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps4aQ8VEJ9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps4aQ8VEJ9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4aQ8VEJ9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4aQ8VEJ9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4aQ8VEJ9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4aQ8VEJ9 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.42■□□□□ 0.86
Vps4aQ8VEJ9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Vps4aQ8VEJ9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4aQ8VEJ9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4aQ8VEJ9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4aQ8VEJ9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps4aQ8VEJ9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.42■□□□□ 0.86
Vps4aQ8VEJ9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.41■□□□□ 0.86
Vps4aQ8VEJ9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.41■□□□□ 0.86
Vps4aQ8VEJ9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vps4aQ8VEJ9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps4aQ8VEJ9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps4aQ8VEJ9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps4aQ8VEJ9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.4■□□□□ 0.86
Vps4aQ8VEJ9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.4■□□□□ 0.86
Vps4aQ8VEJ9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps4aQ8VEJ9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps4aQ8VEJ9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps4aQ8VEJ9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Vps4aQ8VEJ9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps4aQ8VEJ9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.39■□□□□ 0.86
Vps4aQ8VEJ9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Vps4aQ8VEJ9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vps4aQ8VEJ9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Vps4aQ8VEJ9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.39■□□□□ 0.85
Vps4aQ8VEJ9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps4aQ8VEJ9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vps4aQ8VEJ9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.38■□□□□ 0.85
Vps4aQ8VEJ9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps4aQ8VEJ9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps4aQ8VEJ9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Vps4aQ8VEJ9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Vps4aQ8VEJ9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps4aQ8VEJ9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.37■□□□□ 0.85
Vps4aQ8VEJ9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms