Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SMARCC2Q8TAQ2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SMARCC2Q8TAQ2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SMARCC2Q8TAQ2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.73■■■□□ 2.03
SMARCC2Q8TAQ2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC27.73■■■□□ 2.03
SMARCC2Q8TAQ2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
SMARCC2Q8TAQ2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SMARCC2Q8TAQ2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.72■■■□□ 2.03
SMARCC2Q8TAQ2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.72■■■□□ 2.03
SMARCC2Q8TAQ2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SMARCC2Q8TAQ2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SMARCC2Q8TAQ2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SMARCC2Q8TAQ2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SMARCC2Q8TAQ2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
SMARCC2Q8TAQ2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
SMARCC2Q8TAQ2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC27.71■■■□□ 2.03
SMARCC2Q8TAQ2 AL139125.2-201ENST00000623134 1869 ntBASIC27.71■■■□□ 2.03
SMARCC2Q8TAQ2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SMARCC2Q8TAQ2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
SMARCC2Q8TAQ2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SMARCC2Q8TAQ2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SMARCC2Q8TAQ2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SMARCC2Q8TAQ2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
SMARCC2Q8TAQ2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SMARCC2Q8TAQ2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
SMARCC2Q8TAQ2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
SMARCC2Q8TAQ2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SMARCC2Q8TAQ2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.68■■■□□ 2.02
SMARCC2Q8TAQ2 BHLHE23-202ENST00000612929 1109 ntBASIC27.68■■■□□ 2.02
SMARCC2Q8TAQ2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
SMARCC2Q8TAQ2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
SMARCC2Q8TAQ2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SMARCC2Q8TAQ2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
SMARCC2Q8TAQ2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SMARCC2Q8TAQ2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SMARCC2Q8TAQ2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SMARCC2Q8TAQ2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SMARCC2Q8TAQ2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SMARCC2Q8TAQ2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.67■■■□□ 2.02
SMARCC2Q8TAQ2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
SMARCC2Q8TAQ2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SMARCC2Q8TAQ2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
SMARCC2Q8TAQ2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.67■■■□□ 2.02
SMARCC2Q8TAQ2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SMARCC2Q8TAQ2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.67■■■□□ 2.02
SMARCC2Q8TAQ2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
SMARCC2Q8TAQ2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
SMARCC2Q8TAQ2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
SMARCC2Q8TAQ2 AC139795.1-202ENST00000500444 432 ntBASIC27.66■■■□□ 2.02
SMARCC2Q8TAQ2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SMARCC2Q8TAQ2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SMARCC2Q8TAQ2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27.65■■■□□ 2.02
SMARCC2Q8TAQ2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SMARCC2Q8TAQ2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
SMARCC2Q8TAQ2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SMARCC2Q8TAQ2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SMARCC2Q8TAQ2 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.64■■■□□ 2.02
SMARCC2Q8TAQ2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SMARCC2Q8TAQ2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
SMARCC2Q8TAQ2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.63■■■□□ 2.01
SMARCC2Q8TAQ2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.63■■■□□ 2.01
SMARCC2Q8TAQ2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.63■■■□□ 2.01
SMARCC2Q8TAQ2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
SMARCC2Q8TAQ2 AP003733.4-201ENST00000623785 1697 ntBASIC27.62■■■□□ 2.01
SMARCC2Q8TAQ2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.62■■■□□ 2.01
SMARCC2Q8TAQ2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC27.62■■■□□ 2.01
SMARCC2Q8TAQ2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
SMARCC2Q8TAQ2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SMARCC2Q8TAQ2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.62■■■□□ 2.01
SMARCC2Q8TAQ2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
SMARCC2Q8TAQ2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SMARCC2Q8TAQ2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC27.6■■■□□ 2.01
SMARCC2Q8TAQ2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SMARCC2Q8TAQ2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.6■■■□□ 2.01
SMARCC2Q8TAQ2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.6■■■□□ 2.01
SMARCC2Q8TAQ2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC27.6■■■□□ 2.01
SMARCC2Q8TAQ2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
SMARCC2Q8TAQ2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SMARCC2Q8TAQ2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SMARCC2Q8TAQ2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SMARCC2Q8TAQ2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SMARCC2Q8TAQ2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SMARCC2Q8TAQ2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SMARCC2Q8TAQ2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.59■■■□□ 2.01
SMARCC2Q8TAQ2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SMARCC2Q8TAQ2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SMARCC2Q8TAQ2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SMARCC2Q8TAQ2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SMARCC2Q8TAQ2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
SMARCC2Q8TAQ2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.58■■■□□ 2
SMARCC2Q8TAQ2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.57■■■□□ 2
SMARCC2Q8TAQ2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.57■■■□□ 2
SMARCC2Q8TAQ2 AC010980.1-201ENST00000587192 1142 ntBASIC27.57■■■□□ 2
SMARCC2Q8TAQ2 AC074183.2-201ENST00000623112 922 ntBASIC27.57■■■□□ 2
SMARCC2Q8TAQ2 EED-207ENST00000528180 1745 ntTSL 5 BASIC27.57■■■□□ 2
SMARCC2Q8TAQ2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SMARCC2Q8TAQ2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.57■■■□□ 2
SMARCC2Q8TAQ2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
SMARCC2Q8TAQ2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.56■■■□□ 2
SMARCC2Q8TAQ2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.56■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms