Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3kbp1Q8R550 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Sh3kbp1Q8R550 Gm10232-201ENSMUST00000089221 720 ntBASIC21.92■■□□□ 1.1
Sh3kbp1Q8R550 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.91■■□□□ 1.1
Sh3kbp1Q8R550 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sh3kbp1Q8R550 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sh3kbp1Q8R550 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sh3kbp1Q8R550 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.91■■□□□ 1.1
Sh3kbp1Q8R550 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sh3kbp1Q8R550 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.91■■□□□ 1.1
Sh3kbp1Q8R550 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sh3kbp1Q8R550 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Sh3kbp1Q8R550 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3kbp1Q8R550 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3kbp1Q8R550 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.89■■□□□ 1.1
Sh3kbp1Q8R550 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Sh3kbp1Q8R550 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3kbp1Q8R550 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3kbp1Q8R550 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.89■■□□□ 1.09
Sh3kbp1Q8R550 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3kbp1Q8R550 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Sh3kbp1Q8R550 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3kbp1Q8R550 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3kbp1Q8R550 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3kbp1Q8R550 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.88■■□□□ 1.09
Sh3kbp1Q8R550 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3kbp1Q8R550 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3kbp1Q8R550 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Sh3kbp1Q8R550 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3kbp1Q8R550 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3kbp1Q8R550 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3kbp1Q8R550 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3kbp1Q8R550 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.87■■□□□ 1.09
Sh3kbp1Q8R550 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Sh3kbp1Q8R550 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Sh3kbp1Q8R550 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
Sh3kbp1Q8R550 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sh3kbp1Q8R550 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sh3kbp1Q8R550 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sh3kbp1Q8R550 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sh3kbp1Q8R550 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sh3kbp1Q8R550 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sh3kbp1Q8R550 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sh3kbp1Q8R550 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sh3kbp1Q8R550 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sh3kbp1Q8R550 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3kbp1Q8R550 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3kbp1Q8R550 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Sh3kbp1Q8R550 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3kbp1Q8R550 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Sh3kbp1Q8R550 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3kbp1Q8R550 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3kbp1Q8R550 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sh3kbp1Q8R550 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Sh3kbp1Q8R550 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.83■■□□□ 1.09
Sh3kbp1Q8R550 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Sh3kbp1Q8R550 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sh3kbp1Q8R550 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sh3kbp1Q8R550 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3kbp1Q8R550 Etf1-202ENSMUST00000180351 108 ntBASIC21.82■■□□□ 1.08
Sh3kbp1Q8R550 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3kbp1Q8R550 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3kbp1Q8R550 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3kbp1Q8R550 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3kbp1Q8R550 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3kbp1Q8R550 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3kbp1Q8R550 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3kbp1Q8R550 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3kbp1Q8R550 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3kbp1Q8R550 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3kbp1Q8R550 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3kbp1Q8R550 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3kbp1Q8R550 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3kbp1Q8R550 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3kbp1Q8R550 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.8■■□□□ 1.08
Sh3kbp1Q8R550 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3kbp1Q8R550 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3kbp1Q8R550 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3kbp1Q8R550 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3kbp1Q8R550 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Sh3kbp1Q8R550 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3kbp1Q8R550 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3kbp1Q8R550 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Sh3kbp1Q8R550 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3kbp1Q8R550 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3kbp1Q8R550 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3kbp1Q8R550 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3kbp1Q8R550 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3kbp1Q8R550 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.78■■□□□ 1.08
Sh3kbp1Q8R550 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.78■■□□□ 1.08
Sh3kbp1Q8R550 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3kbp1Q8R550 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3kbp1Q8R550 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3kbp1Q8R550 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3kbp1Q8R550 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
Sh3kbp1Q8R550 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3kbp1Q8R550 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3kbp1Q8R550 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3kbp1Q8R550 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3kbp1Q8R550 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms