Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Abca8bQ8K440 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Abca8bQ8K440 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Abca8bQ8K440 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Abca8bQ8K440 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC32.59■■■□□ 2.81
Abca8bQ8K440 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC32.59■■■□□ 2.81
Abca8bQ8K440 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
Abca8bQ8K440 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC32.58■■■□□ 2.81
Abca8bQ8K440 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Abca8bQ8K440 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC32.57■■■□□ 2.8
Abca8bQ8K440 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Abca8bQ8K440 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
Abca8bQ8K440 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
Abca8bQ8K440 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Abca8bQ8K440 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC32.56■■■□□ 2.8
Abca8bQ8K440 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC32.56■■■□□ 2.8
Abca8bQ8K440 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
Abca8bQ8K440 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC32.55■■■□□ 2.8
Abca8bQ8K440 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC32.55■■■□□ 2.8
Abca8bQ8K440 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Abca8bQ8K440 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Abca8bQ8K440 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Abca8bQ8K440 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC32.53■■■□□ 2.8
Abca8bQ8K440 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Abca8bQ8K440 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Abca8bQ8K440 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC32.52■■■□□ 2.8
Abca8bQ8K440 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC32.52■■■□□ 2.8
Abca8bQ8K440 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
Abca8bQ8K440 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Abca8bQ8K440 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC32.51■■■□□ 2.8
Abca8bQ8K440 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC32.51■■■□□ 2.8
Abca8bQ8K440 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Abca8bQ8K440 Gm9207-201ENSMUST00000198773 1115 ntBASIC32.51■■■□□ 2.79
Abca8bQ8K440 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
Abca8bQ8K440 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
Abca8bQ8K440 Gm29257-201ENSMUST00000186115 639 ntBASIC32.5■■■□□ 2.79
Abca8bQ8K440 Gm43017-201ENSMUST00000198296 752 ntBASIC32.5■■■□□ 2.79
Abca8bQ8K440 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Abca8bQ8K440 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
Abca8bQ8K440 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Abca8bQ8K440 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
Abca8bQ8K440 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC32.48■■■□□ 2.79
Abca8bQ8K440 AC164629.5-201ENSMUST00000220387 632 ntBASIC32.48■■■□□ 2.79
Abca8bQ8K440 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Abca8bQ8K440 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Abca8bQ8K440 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Abca8bQ8K440 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Abca8bQ8K440 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Abca8bQ8K440 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Abca8bQ8K440 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Abca8bQ8K440 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Abca8bQ8K440 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Abca8bQ8K440 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC32.46■■■□□ 2.79
Abca8bQ8K440 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Abca8bQ8K440 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.79
Abca8bQ8K440 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
Abca8bQ8K440 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Abca8bQ8K440 Gm42699-201ENSMUST00000198104 1657 ntBASIC32.45■■■□□ 2.78
Abca8bQ8K440 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Abca8bQ8K440 Gm21168-201ENSMUST00000199646 1096 ntBASIC32.44■■■□□ 2.78
Abca8bQ8K440 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Abca8bQ8K440 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC32.44■■■□□ 2.78
Abca8bQ8K440 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Abca8bQ8K440 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Abca8bQ8K440 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC32.42■■■□□ 2.78
Abca8bQ8K440 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC32.42■■■□□ 2.78
Abca8bQ8K440 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Abca8bQ8K440 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
Abca8bQ8K440 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC32.41■■■□□ 2.78
Abca8bQ8K440 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
Abca8bQ8K440 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Abca8bQ8K440 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC32.4■■■□□ 2.78
Abca8bQ8K440 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Abca8bQ8K440 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Abca8bQ8K440 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Abca8bQ8K440 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
Abca8bQ8K440 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
Abca8bQ8K440 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Abca8bQ8K440 Gm43137-201ENSMUST00000198052 594 ntBASIC32.39■■■□□ 2.78
Abca8bQ8K440 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Abca8bQ8K440 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Abca8bQ8K440 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Abca8bQ8K440 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Abca8bQ8K440 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Abca8bQ8K440 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC32.37■■■□□ 2.77
Abca8bQ8K440 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Abca8bQ8K440 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Abca8bQ8K440 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Abca8bQ8K440 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Abca8bQ8K440 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Abca8bQ8K440 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Abca8bQ8K440 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
Abca8bQ8K440 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Abca8bQ8K440 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Abca8bQ8K440 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Abca8bQ8K440 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Abca8bQ8K440 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC32.33■■■□□ 2.77
Abca8bQ8K440 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC32.33■■■□□ 2.77
Abca8bQ8K440 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC32.33■■■□□ 2.77
Abca8bQ8K440 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms