Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3rf3Q8C120 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3rf3Q8C120 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
Sh3rf3Q8C120 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3rf3Q8C120 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.22■■□□□ 1.15
Sh3rf3Q8C120 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3rf3Q8C120 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3rf3Q8C120 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Sh3rf3Q8C120 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Sh3rf3Q8C120 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Sh3rf3Q8C120 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Sh3rf3Q8C120 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.21■■□□□ 1.15
Sh3rf3Q8C120 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Sh3rf3Q8C120 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Sh3rf3Q8C120 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Sh3rf3Q8C120 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sh3rf3Q8C120 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sh3rf3Q8C120 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sh3rf3Q8C120 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sh3rf3Q8C120 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.2■■□□□ 1.14
Sh3rf3Q8C120 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sh3rf3Q8C120 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Sh3rf3Q8C120 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Sh3rf3Q8C120 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
Sh3rf3Q8C120 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sh3rf3Q8C120 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sh3rf3Q8C120 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sh3rf3Q8C120 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Sh3rf3Q8C120 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Sh3rf3Q8C120 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.18■■□□□ 1.14
Sh3rf3Q8C120 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.18■■□□□ 1.14
Sh3rf3Q8C120 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.17■■□□□ 1.14
Sh3rf3Q8C120 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sh3rf3Q8C120 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Sh3rf3Q8C120 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sh3rf3Q8C120 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sh3rf3Q8C120 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sh3rf3Q8C120 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sh3rf3Q8C120 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.16■■□□□ 1.14
Sh3rf3Q8C120 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sh3rf3Q8C120 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sh3rf3Q8C120 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3rf3Q8C120 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3rf3Q8C120 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3rf3Q8C120 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3rf3Q8C120 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3rf3Q8C120 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3rf3Q8C120 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sh3rf3Q8C120 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sh3rf3Q8C120 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
Sh3rf3Q8C120 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sh3rf3Q8C120 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sh3rf3Q8C120 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
Sh3rf3Q8C120 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sh3rf3Q8C120 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sh3rf3Q8C120 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.13■■□□□ 1.13
Sh3rf3Q8C120 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.12■■□□□ 1.13
Sh3rf3Q8C120 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sh3rf3Q8C120 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sh3rf3Q8C120 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sh3rf3Q8C120 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.12■■□□□ 1.13
Sh3rf3Q8C120 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sh3rf3Q8C120 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sh3rf3Q8C120 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sh3rf3Q8C120 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
Sh3rf3Q8C120 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sh3rf3Q8C120 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sh3rf3Q8C120 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Sh3rf3Q8C120 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Sh3rf3Q8C120 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.11■■□□□ 1.13
Sh3rf3Q8C120 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sh3rf3Q8C120 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sh3rf3Q8C120 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sh3rf3Q8C120 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Sh3rf3Q8C120 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sh3rf3Q8C120 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Sh3rf3Q8C120 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.1■■□□□ 1.13
Sh3rf3Q8C120 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Sh3rf3Q8C120 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Sh3rf3Q8C120 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.1■■□□□ 1.13
Sh3rf3Q8C120 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sh3rf3Q8C120 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3rf3Q8C120 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.09■■□□□ 1.13
Sh3rf3Q8C120 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.09■■□□□ 1.13
Sh3rf3Q8C120 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3rf3Q8C120 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sh3rf3Q8C120 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Sh3rf3Q8C120 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.09■■□□□ 1.13
Sh3rf3Q8C120 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3rf3Q8C120 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3rf3Q8C120 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3rf3Q8C120 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3rf3Q8C120 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3rf3Q8C120 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3rf3Q8C120 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3rf3Q8C120 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.12
Sh3rf3Q8C120 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Sh3rf3Q8C120 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.12
Sh3rf3Q8C120 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sh3rf3Q8C120 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms