Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh20Q8BIZ0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh20Q8BIZ0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh20Q8BIZ0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh20Q8BIZ0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pcdh20Q8BIZ0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.66■□□□□ 0.9
Pcdh20Q8BIZ0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh20Q8BIZ0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh20Q8BIZ0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdh20Q8BIZ0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh20Q8BIZ0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh20Q8BIZ0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdh20Q8BIZ0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh20Q8BIZ0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh20Q8BIZ0 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.65■□□□□ 0.9
Pcdh20Q8BIZ0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pcdh20Q8BIZ0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh20Q8BIZ0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdh20Q8BIZ0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdh20Q8BIZ0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdh20Q8BIZ0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh20Q8BIZ0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh20Q8BIZ0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh20Q8BIZ0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh20Q8BIZ0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh20Q8BIZ0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh20Q8BIZ0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh20Q8BIZ0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
Pcdh20Q8BIZ0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh20Q8BIZ0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Pcdh20Q8BIZ0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh20Q8BIZ0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh20Q8BIZ0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh20Q8BIZ0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh20Q8BIZ0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh20Q8BIZ0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh20Q8BIZ0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh20Q8BIZ0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pcdh20Q8BIZ0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh20Q8BIZ0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh20Q8BIZ0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdh20Q8BIZ0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh20Q8BIZ0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdh20Q8BIZ0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh20Q8BIZ0 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.6■□□□□ 0.89
Pcdh20Q8BIZ0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdh20Q8BIZ0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh20Q8BIZ0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdh20Q8BIZ0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh20Q8BIZ0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh20Q8BIZ0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh20Q8BIZ0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh20Q8BIZ0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh20Q8BIZ0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh20Q8BIZ0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh20Q8BIZ0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.59■□□□□ 0.89
Pcdh20Q8BIZ0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdh20Q8BIZ0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh20Q8BIZ0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh20Q8BIZ0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh20Q8BIZ0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Pcdh20Q8BIZ0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh20Q8BIZ0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh20Q8BIZ0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.57■□□□□ 0.88
Pcdh20Q8BIZ0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh20Q8BIZ0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh20Q8BIZ0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.57■□□□□ 0.88
Pcdh20Q8BIZ0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh20Q8BIZ0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh20Q8BIZ0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pcdh20Q8BIZ0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
Pcdh20Q8BIZ0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh20Q8BIZ0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdh20Q8BIZ0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh20Q8BIZ0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh20Q8BIZ0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdh20Q8BIZ0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdh20Q8BIZ0 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.56■□□□□ 0.88
Pcdh20Q8BIZ0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh20Q8BIZ0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh20Q8BIZ0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh20Q8BIZ0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdh20Q8BIZ0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh20Q8BIZ0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pcdh20Q8BIZ0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Pcdh20Q8BIZ0 Gm5921-201ENSMUST00000075898 882 ntBASIC20.55■□□□□ 0.88
Pcdh20Q8BIZ0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh20Q8BIZ0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh20Q8BIZ0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh20Q8BIZ0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.55■□□□□ 0.88
Pcdh20Q8BIZ0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh20Q8BIZ0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh20Q8BIZ0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcdh20Q8BIZ0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh20Q8BIZ0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcdh20Q8BIZ0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh20Q8BIZ0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Pcdh20Q8BIZ0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh20Q8BIZ0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh20Q8BIZ0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms