Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nod1Q8BHB0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nod1Q8BHB0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.51■■□□□ 1.19
Nod1Q8BHB0 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.51■■□□□ 1.19
Nod1Q8BHB0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nod1Q8BHB0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nod1Q8BHB0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nod1Q8BHB0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nod1Q8BHB0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Nod1Q8BHB0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nod1Q8BHB0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.49■■□□□ 1.19
Nod1Q8BHB0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nod1Q8BHB0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nod1Q8BHB0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nod1Q8BHB0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Nod1Q8BHB0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nod1Q8BHB0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Nod1Q8BHB0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
Nod1Q8BHB0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nod1Q8BHB0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Nod1Q8BHB0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Nod1Q8BHB0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Nod1Q8BHB0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nod1Q8BHB0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nod1Q8BHB0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nod1Q8BHB0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Nod1Q8BHB0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Nod1Q8BHB0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Nod1Q8BHB0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Nod1Q8BHB0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.46■■□□□ 1.19
Nod1Q8BHB0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nod1Q8BHB0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nod1Q8BHB0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Nod1Q8BHB0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.45■■□□□ 1.18
Nod1Q8BHB0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nod1Q8BHB0 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.45■■□□□ 1.18
Nod1Q8BHB0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nod1Q8BHB0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nod1Q8BHB0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Nod1Q8BHB0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Nod1Q8BHB0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Nod1Q8BHB0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Nod1Q8BHB0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Nod1Q8BHB0 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.44■■□□□ 1.18
Nod1Q8BHB0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Nod1Q8BHB0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Nod1Q8BHB0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Nod1Q8BHB0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nod1Q8BHB0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nod1Q8BHB0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
Nod1Q8BHB0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Nod1Q8BHB0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nod1Q8BHB0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.42■■□□□ 1.18
Nod1Q8BHB0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.42■■□□□ 1.18
Nod1Q8BHB0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.42■■□□□ 1.18
Nod1Q8BHB0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nod1Q8BHB0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nod1Q8BHB0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nod1Q8BHB0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.41■■□□□ 1.18
Nod1Q8BHB0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.41■■□□□ 1.18
Nod1Q8BHB0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.41■■□□□ 1.18
Nod1Q8BHB0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nod1Q8BHB0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Nod1Q8BHB0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Nod1Q8BHB0 Gm12821-201ENSMUST00000120022 600 ntBASIC22.4■■□□□ 1.18
Nod1Q8BHB0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.4■■□□□ 1.18
Nod1Q8BHB0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Nod1Q8BHB0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.4■■□□□ 1.18
Nod1Q8BHB0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Nod1Q8BHB0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Nod1Q8BHB0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Nod1Q8BHB0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Nod1Q8BHB0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Nod1Q8BHB0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
Nod1Q8BHB0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Nod1Q8BHB0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Nod1Q8BHB0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.39■■□□□ 1.17
Nod1Q8BHB0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.39■■□□□ 1.17
Nod1Q8BHB0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Nod1Q8BHB0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Nod1Q8BHB0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Nod1Q8BHB0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nod1Q8BHB0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.38■■□□□ 1.17
Nod1Q8BHB0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nod1Q8BHB0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nod1Q8BHB0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Nod1Q8BHB0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nod1Q8BHB0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nod1Q8BHB0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.37■■□□□ 1.17
Nod1Q8BHB0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Nod1Q8BHB0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Nod1Q8BHB0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Nod1Q8BHB0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Nod1Q8BHB0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.36■■□□□ 1.17
Nod1Q8BHB0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Nod1Q8BHB0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nod1Q8BHB0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Nod1Q8BHB0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.35■■□□□ 1.17
Nod1Q8BHB0 Golgb1-201ENSMUST00000023534 498 ntBASIC22.35■■□□□ 1.17
Nod1Q8BHB0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms