Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4dQ8BGV9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4dQ8BGV9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.03■□□□□ 0.8
Atg4dQ8BGV9 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.03■□□□□ 0.8
Atg4dQ8BGV9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4dQ8BGV9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.03■□□□□ 0.8
Atg4dQ8BGV9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Atg4dQ8BGV9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4dQ8BGV9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4dQ8BGV9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4dQ8BGV9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Atg4dQ8BGV9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4dQ8BGV9 Gm5812-201ENSMUST00000061073 957 ntBASIC20.02■□□□□ 0.8
Atg4dQ8BGV9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4dQ8BGV9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Atg4dQ8BGV9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atg4dQ8BGV9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atg4dQ8BGV9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4dQ8BGV9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4dQ8BGV9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Atg4dQ8BGV9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4dQ8BGV9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4dQ8BGV9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Atg4dQ8BGV9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20■□□□□ 0.79
Atg4dQ8BGV9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4dQ8BGV9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4dQ8BGV9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20■□□□□ 0.79
Atg4dQ8BGV9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20■□□□□ 0.79
Atg4dQ8BGV9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Atg4dQ8BGV9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Atg4dQ8BGV9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4dQ8BGV9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20■□□□□ 0.79
Atg4dQ8BGV9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20■□□□□ 0.79
Atg4dQ8BGV9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4dQ8BGV9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20■□□□□ 0.79
Atg4dQ8BGV9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4dQ8BGV9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4dQ8BGV9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4dQ8BGV9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4dQ8BGV9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Atg4dQ8BGV9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4dQ8BGV9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4dQ8BGV9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.99■□□□□ 0.79
Atg4dQ8BGV9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.98■□□□□ 0.79
Atg4dQ8BGV9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Atg4dQ8BGV9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atg4dQ8BGV9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Atg4dQ8BGV9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.98■□□□□ 0.79
Atg4dQ8BGV9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atg4dQ8BGV9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Atg4dQ8BGV9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atg4dQ8BGV9 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.97■□□□□ 0.79
Atg4dQ8BGV9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Atg4dQ8BGV9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atg4dQ8BGV9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4dQ8BGV9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4dQ8BGV9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4dQ8BGV9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4dQ8BGV9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.96■□□□□ 0.79
Atg4dQ8BGV9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4dQ8BGV9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4dQ8BGV9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4dQ8BGV9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4dQ8BGV9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4dQ8BGV9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4dQ8BGV9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Atg4dQ8BGV9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atg4dQ8BGV9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atg4dQ8BGV9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Atg4dQ8BGV9 Gm10232-201ENSMUST00000089221 720 ntBASIC19.95■□□□□ 0.78
Atg4dQ8BGV9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atg4dQ8BGV9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atg4dQ8BGV9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Atg4dQ8BGV9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atg4dQ8BGV9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atg4dQ8BGV9 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.94■□□□□ 0.78
Atg4dQ8BGV9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.94■□□□□ 0.78
Atg4dQ8BGV9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.94■□□□□ 0.78
Atg4dQ8BGV9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.94■□□□□ 0.78
Atg4dQ8BGV9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atg4dQ8BGV9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atg4dQ8BGV9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
Atg4dQ8BGV9 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.93■□□□□ 0.78
Atg4dQ8BGV9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atg4dQ8BGV9 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.92■□□□□ 0.78
Atg4dQ8BGV9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.92■□□□□ 0.78
Atg4dQ8BGV9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Atg4dQ8BGV9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Atg4dQ8BGV9 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.92■□□□□ 0.78
Atg4dQ8BGV9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atg4dQ8BGV9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Atg4dQ8BGV9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atg4dQ8BGV9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Atg4dQ8BGV9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Atg4dQ8BGV9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atg4dQ8BGV9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atg4dQ8BGV9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atg4dQ8BGV9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atg4dQ8BGV9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atg4dQ8BGV9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms