Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.81■■□□□ 1.08
VRK2Q86Y07 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VRK2Q86Y07 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VRK2Q86Y07 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VRK2Q86Y07 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VRK2Q86Y07 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VRK2Q86Y07 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VRK2Q86Y07 LINC01124-201ENST00000409786 2117 ntBASIC21.8■■□□□ 1.08
VRK2Q86Y07 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VRK2Q86Y07 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK2Q86Y07 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.79■■□□□ 1.08
VRK2Q86Y07 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK2Q86Y07 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK2Q86Y07 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.79■■□□□ 1.08
VRK2Q86Y07 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK2Q86Y07 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK2Q86Y07 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK2Q86Y07 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VRK2Q86Y07 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VRK2Q86Y07 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VRK2Q86Y07 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VRK2Q86Y07 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VRK2Q86Y07 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VRK2Q86Y07 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.77■■□□□ 1.08
VRK2Q86Y07 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VRK2Q86Y07 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VRK2Q86Y07 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.76■■□□□ 1.07
VRK2Q86Y07 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.76■■□□□ 1.07
VRK2Q86Y07 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.76■■□□□ 1.07
VRK2Q86Y07 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VRK2Q86Y07 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VRK2Q86Y07 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VRK2Q86Y07 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.75■■□□□ 1.07
VRK2Q86Y07 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.75■■□□□ 1.07
VRK2Q86Y07 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.75■■□□□ 1.07
VRK2Q86Y07 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VRK2Q86Y07 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.75■■□□□ 1.07
VRK2Q86Y07 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
VRK2Q86Y07 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.74■■□□□ 1.07
VRK2Q86Y07 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
VRK2Q86Y07 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
VRK2Q86Y07 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
VRK2Q86Y07 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VRK2Q86Y07 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.73■■□□□ 1.07
VRK2Q86Y07 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.73■■□□□ 1.07
VRK2Q86Y07 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VRK2Q86Y07 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VRK2Q86Y07 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VRK2Q86Y07 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRK2Q86Y07 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.72■■□□□ 1.07
VRK2Q86Y07 AL592293.1-201ENST00000502889 1188 ntBASIC21.72■■□□□ 1.07
VRK2Q86Y07 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRK2Q86Y07 MIR6089-201ENST00000616698 64 ntBASIC21.72■■□□□ 1.07
VRK2Q86Y07 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRK2Q86Y07 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRK2Q86Y07 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.72■■□□□ 1.07
VRK2Q86Y07 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VRK2Q86Y07 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VRK2Q86Y07 KRT18P10-201ENST00000388836 1287 ntBASIC21.71■■□□□ 1.07
VRK2Q86Y07 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VRK2Q86Y07 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.7■■□□□ 1.07
VRK2Q86Y07 FOXO3B-201ENST00000395675 1928 ntBASIC21.7■■□□□ 1.07
VRK2Q86Y07 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
VRK2Q86Y07 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.7■■□□□ 1.06
VRK2Q86Y07 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.7■■□□□ 1.06
VRK2Q86Y07 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
VRK2Q86Y07 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.7■■□□□ 1.06
VRK2Q86Y07 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
VRK2Q86Y07 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
VRK2Q86Y07 RARRES2P2-201ENST00000394842 485 ntBASIC21.69■■□□□ 1.06
VRK2Q86Y07 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VRK2Q86Y07 SPCS2P3-201ENST00000500401 656 ntBASIC21.69■■□□□ 1.06
VRK2Q86Y07 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
VRK2Q86Y07 HSD17B1P1-201ENST00000590052 955 ntBASIC21.69■■□□□ 1.06
VRK2Q86Y07 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.69■■□□□ 1.06
VRK2Q86Y07 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRK2Q86Y07 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRK2Q86Y07 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms