Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Trnp1Q80ZI1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Trnp1Q80ZI1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.59■■□□□ 1.53
Trnp1Q80ZI1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trnp1Q80ZI1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trnp1Q80ZI1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trnp1Q80ZI1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC24.59■■□□□ 1.53
Trnp1Q80ZI1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.58■■□□□ 1.53
Trnp1Q80ZI1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Trnp1Q80ZI1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Trnp1Q80ZI1 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.58■■□□□ 1.52
Trnp1Q80ZI1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC24.57■■□□□ 1.52
Trnp1Q80ZI1 Gm6139-201ENSMUST00000079261 882 ntBASIC24.57■■□□□ 1.52
Trnp1Q80ZI1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trnp1Q80ZI1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
Trnp1Q80ZI1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.56■■□□□ 1.52
Trnp1Q80ZI1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trnp1Q80ZI1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Trnp1Q80ZI1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trnp1Q80ZI1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trnp1Q80ZI1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trnp1Q80ZI1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Trnp1Q80ZI1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trnp1Q80ZI1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trnp1Q80ZI1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC24.55■■□□□ 1.52
Trnp1Q80ZI1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Trnp1Q80ZI1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Trnp1Q80ZI1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trnp1Q80ZI1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trnp1Q80ZI1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trnp1Q80ZI1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trnp1Q80ZI1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trnp1Q80ZI1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trnp1Q80ZI1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trnp1Q80ZI1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trnp1Q80ZI1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trnp1Q80ZI1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
Trnp1Q80ZI1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trnp1Q80ZI1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Trnp1Q80ZI1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trnp1Q80ZI1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trnp1Q80ZI1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
Trnp1Q80ZI1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trnp1Q80ZI1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC24.51■■□□□ 1.51
Trnp1Q80ZI1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trnp1Q80ZI1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Trnp1Q80ZI1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Trnp1Q80ZI1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trnp1Q80ZI1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Trnp1Q80ZI1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trnp1Q80ZI1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC24.5■■□□□ 1.51
Trnp1Q80ZI1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC24.5■■□□□ 1.51
Trnp1Q80ZI1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.5■■□□□ 1.51
Trnp1Q80ZI1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trnp1Q80ZI1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trnp1Q80ZI1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trnp1Q80ZI1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trnp1Q80ZI1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trnp1Q80ZI1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Trnp1Q80ZI1 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.47■■□□□ 1.51
Trnp1Q80ZI1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Trnp1Q80ZI1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC24.47■■□□□ 1.51
Trnp1Q80ZI1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC24.47■■□□□ 1.51
Trnp1Q80ZI1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Trnp1Q80ZI1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trnp1Q80ZI1 Gm21168-201ENSMUST00000199646 1096 ntBASIC24.47■■□□□ 1.51
Trnp1Q80ZI1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.47■■□□□ 1.51
Trnp1Q80ZI1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trnp1Q80ZI1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trnp1Q80ZI1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trnp1Q80ZI1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Trnp1Q80ZI1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trnp1Q80ZI1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trnp1Q80ZI1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trnp1Q80ZI1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.46■■□□□ 1.51
Trnp1Q80ZI1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Trnp1Q80ZI1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
Trnp1Q80ZI1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
Trnp1Q80ZI1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trnp1Q80ZI1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trnp1Q80ZI1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC24.44■■□□□ 1.5
Trnp1Q80ZI1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Trnp1Q80ZI1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trnp1Q80ZI1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Trnp1Q80ZI1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trnp1Q80ZI1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trnp1Q80ZI1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.43■■□□□ 1.5
Trnp1Q80ZI1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.43■■□□□ 1.5
Trnp1Q80ZI1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Trnp1Q80ZI1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trnp1Q80ZI1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Trnp1Q80ZI1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trnp1Q80ZI1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC24.42■■□□□ 1.5
Trnp1Q80ZI1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trnp1Q80ZI1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC24.42■■□□□ 1.5
Trnp1Q80ZI1 Gm43137-201ENSMUST00000198052 594 ntBASIC24.42■■□□□ 1.5
Trnp1Q80ZI1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Trnp1Q80ZI1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC24.42■■□□□ 1.5
Trnp1Q80ZI1 Gm9870-201ENSMUST00000063874 645 ntBASIC24.42■■□□□ 1.5
Trnp1Q80ZI1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 295.3 ms