Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Lrrtm4Q80XG9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrrtm4Q80XG9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrrtm4Q80XG9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Lrrtm4Q80XG9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrrtm4Q80XG9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrtm4Q80XG9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrtm4Q80XG9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrtm4Q80XG9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrtm4Q80XG9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Lrrtm4Q80XG9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrtm4Q80XG9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrtm4Q80XG9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.79■□□□□ 0.92
Lrrtm4Q80XG9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrtm4Q80XG9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrtm4Q80XG9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrtm4Q80XG9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrtm4Q80XG9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrtm4Q80XG9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrtm4Q80XG9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrtm4Q80XG9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrtm4Q80XG9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrtm4Q80XG9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrtm4Q80XG9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrtm4Q80XG9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrtm4Q80XG9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.77■□□□□ 0.92
Lrrtm4Q80XG9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.77■□□□□ 0.92
Lrrtm4Q80XG9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrtm4Q80XG9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrtm4Q80XG9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lrrtm4Q80XG9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.76■□□□□ 0.91
Lrrtm4Q80XG9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrrtm4Q80XG9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrrtm4Q80XG9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrrtm4Q80XG9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrrtm4Q80XG9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lrrtm4Q80XG9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrrtm4Q80XG9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrrtm4Q80XG9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrrtm4Q80XG9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.75■□□□□ 0.91
Lrrtm4Q80XG9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.75■□□□□ 0.91
Lrrtm4Q80XG9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrrtm4Q80XG9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrrtm4Q80XG9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrrtm4Q80XG9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lrrtm4Q80XG9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrrtm4Q80XG9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Lrrtm4Q80XG9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrrtm4Q80XG9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.74■□□□□ 0.91
Lrrtm4Q80XG9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.74■□□□□ 0.91
Lrrtm4Q80XG9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrrtm4Q80XG9 Rps24-207ENSMUST00000224568 714 ntBASIC20.74■□□□□ 0.91
Lrrtm4Q80XG9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrrtm4Q80XG9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrrtm4Q80XG9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.73■□□□□ 0.91
Lrrtm4Q80XG9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrtm4Q80XG9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrtm4Q80XG9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrtm4Q80XG9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrtm4Q80XG9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrtm4Q80XG9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrtm4Q80XG9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrtm4Q80XG9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrtm4Q80XG9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Lrrtm4Q80XG9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrtm4Q80XG9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrtm4Q80XG9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrtm4Q80XG9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lrrtm4Q80XG9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.71■□□□□ 0.91
Lrrtm4Q80XG9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.71■□□□□ 0.91
Lrrtm4Q80XG9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrrtm4Q80XG9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrrtm4Q80XG9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Lrrtm4Q80XG9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Lrrtm4Q80XG9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.7■□□□□ 0.9
Lrrtm4Q80XG9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Lrrtm4Q80XG9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.7■□□□□ 0.9
Lrrtm4Q80XG9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrtm4Q80XG9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrtm4Q80XG9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.7■□□□□ 0.9
Lrrtm4Q80XG9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.7■□□□□ 0.9
Lrrtm4Q80XG9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrtm4Q80XG9 Gm9959-201ENSMUST00000068277 390 ntBASIC20.7■□□□□ 0.9
Lrrtm4Q80XG9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrtm4Q80XG9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrtm4Q80XG9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrtm4Q80XG9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrtm4Q80XG9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrtm4Q80XG9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrtm4Q80XG9 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.69■□□□□ 0.9
Lrrtm4Q80XG9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.69■□□□□ 0.9
Lrrtm4Q80XG9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrtm4Q80XG9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrtm4Q80XG9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.69■□□□□ 0.9
Lrrtm4Q80XG9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrtm4Q80XG9 Gm10399-202ENSMUST00000202768 748 ntBASIC20.68■□□□□ 0.9
Lrrtm4Q80XG9 Gm45102-201ENSMUST00000207427 857 ntBASIC20.68■□□□□ 0.9
Lrrtm4Q80XG9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.68■□□□□ 0.9
Lrrtm4Q80XG9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrtm4Q80XG9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms