Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.75■■□□□ 1.39
Usp6nlQ80XC3 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.74■■□□□ 1.39
Usp6nlQ80XC3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Usp6nlQ80XC3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.74■■□□□ 1.39
Usp6nlQ80XC3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Usp6nlQ80XC3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Usp6nlQ80XC3 Gm12821-201ENSMUST00000120022 600 ntBASIC23.73■■□□□ 1.39
Usp6nlQ80XC3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.73■■□□□ 1.39
Usp6nlQ80XC3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp6nlQ80XC3 Golgb1-201ENSMUST00000023534 498 ntBASIC23.73■■□□□ 1.39
Usp6nlQ80XC3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp6nlQ80XC3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Usp6nlQ80XC3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp6nlQ80XC3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp6nlQ80XC3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.72■■□□□ 1.39
Usp6nlQ80XC3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Usp6nlQ80XC3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.72■■□□□ 1.39
Usp6nlQ80XC3 Gm27454-201ENSMUST00000185090 204 ntBASIC23.72■■□□□ 1.39
Usp6nlQ80XC3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
Usp6nlQ80XC3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Usp6nlQ80XC3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Usp6nlQ80XC3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC23.72■■□□□ 1.39
Usp6nlQ80XC3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.72■■□□□ 1.39
Usp6nlQ80XC3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Usp6nlQ80XC3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp6nlQ80XC3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.71■■□□□ 1.39
Usp6nlQ80XC3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp6nlQ80XC3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Usp6nlQ80XC3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Usp6nlQ80XC3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp6nlQ80XC3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.7■■□□□ 1.38
Usp6nlQ80XC3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp6nlQ80XC3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp6nlQ80XC3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp6nlQ80XC3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp6nlQ80XC3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp6nlQ80XC3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp6nlQ80XC3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp6nlQ80XC3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp6nlQ80XC3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp6nlQ80XC3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Usp6nlQ80XC3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Usp6nlQ80XC3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp6nlQ80XC3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Usp6nlQ80XC3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp6nlQ80XC3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.68■■□□□ 1.38
Usp6nlQ80XC3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.66■■□□□ 1.38
Usp6nlQ80XC3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.66■■□□□ 1.38
Usp6nlQ80XC3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Usp6nlQ80XC3 Serp2-204ENSMUST00000228055 705 ntBASIC23.66■■□□□ 1.38
Usp6nlQ80XC3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp6nlQ80XC3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.66■■□□□ 1.38
Usp6nlQ80XC3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp6nlQ80XC3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp6nlQ80XC3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Usp6nlQ80XC3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Usp6nlQ80XC3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Usp6nlQ80XC3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp6nlQ80XC3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp6nlQ80XC3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Usp6nlQ80XC3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Usp6nlQ80XC3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Usp6nlQ80XC3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
Usp6nlQ80XC3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Usp6nlQ80XC3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Usp6nlQ80XC3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
Usp6nlQ80XC3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Usp6nlQ80XC3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Usp6nlQ80XC3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.63■■□□□ 1.37
Usp6nlQ80XC3 Gm45417-201ENSMUST00000209533 758 ntBASIC23.63■■□□□ 1.37
Usp6nlQ80XC3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Usp6nlQ80XC3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp6nlQ80XC3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Usp6nlQ80XC3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp6nlQ80XC3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Usp6nlQ80XC3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Usp6nlQ80XC3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Usp6nlQ80XC3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Usp6nlQ80XC3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Usp6nlQ80XC3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Usp6nlQ80XC3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp6nlQ80XC3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Usp6nlQ80XC3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Usp6nlQ80XC3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp6nlQ80XC3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Usp6nlQ80XC3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Usp6nlQ80XC3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.59■■□□□ 1.37
Usp6nlQ80XC3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Usp6nlQ80XC3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Usp6nlQ80XC3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Usp6nlQ80XC3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Usp6nlQ80XC3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Usp6nlQ80XC3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp6nlQ80XC3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.57■■□□□ 1.36
Usp6nlQ80XC3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.57■■□□□ 1.36
Usp6nlQ80XC3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp6nlQ80XC3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp6nlQ80XC3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp6nlQ80XC3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.57■■□□□ 1.36
Usp6nlQ80XC3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms