Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trappc6aQ78XR0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trappc6aQ78XR0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.22■□□□□ 0.99
Trappc6aQ78XR0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.22■□□□□ 0.99
Trappc6aQ78XR0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trappc6aQ78XR0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trappc6aQ78XR0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trappc6aQ78XR0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trappc6aQ78XR0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trappc6aQ78XR0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.21■□□□□ 0.99
Trappc6aQ78XR0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.21■□□□□ 0.99
Trappc6aQ78XR0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.21■□□□□ 0.99
Trappc6aQ78XR0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trappc6aQ78XR0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trappc6aQ78XR0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.21■□□□□ 0.99
Trappc6aQ78XR0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trappc6aQ78XR0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trappc6aQ78XR0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trappc6aQ78XR0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
Trappc6aQ78XR0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trappc6aQ78XR0 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.2■□□□□ 0.98
Trappc6aQ78XR0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trappc6aQ78XR0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trappc6aQ78XR0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trappc6aQ78XR0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.19■□□□□ 0.98
Trappc6aQ78XR0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trappc6aQ78XR0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trappc6aQ78XR0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trappc6aQ78XR0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.19■□□□□ 0.98
Trappc6aQ78XR0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trappc6aQ78XR0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trappc6aQ78XR0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trappc6aQ78XR0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trappc6aQ78XR0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trappc6aQ78XR0 Gm27454-201ENSMUST00000185090 204 ntBASIC21.17■□□□□ 0.98
Trappc6aQ78XR0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.17■□□□□ 0.98
Trappc6aQ78XR0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
Trappc6aQ78XR0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trappc6aQ78XR0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Trappc6aQ78XR0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.17■□□□□ 0.98
Trappc6aQ78XR0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trappc6aQ78XR0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trappc6aQ78XR0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trappc6aQ78XR0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trappc6aQ78XR0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.16■□□□□ 0.98
Trappc6aQ78XR0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.16■□□□□ 0.98
Trappc6aQ78XR0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trappc6aQ78XR0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Trappc6aQ78XR0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.16■□□□□ 0.98
Trappc6aQ78XR0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trappc6aQ78XR0 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.16■□□□□ 0.98
Trappc6aQ78XR0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trappc6aQ78XR0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trappc6aQ78XR0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trappc6aQ78XR0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trappc6aQ78XR0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.14■□□□□ 0.97
Trappc6aQ78XR0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trappc6aQ78XR0 Gm45417-201ENSMUST00000209533 758 ntBASIC21.14■□□□□ 0.97
Trappc6aQ78XR0 Golgb1-201ENSMUST00000023534 498 ntBASIC21.14■□□□□ 0.97
Trappc6aQ78XR0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Trappc6aQ78XR0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trappc6aQ78XR0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trappc6aQ78XR0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.12■□□□□ 0.97
Trappc6aQ78XR0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.12■□□□□ 0.97
Trappc6aQ78XR0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trappc6aQ78XR0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trappc6aQ78XR0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trappc6aQ78XR0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.11■□□□□ 0.97
Trappc6aQ78XR0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.11■□□□□ 0.97
Trappc6aQ78XR0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trappc6aQ78XR0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trappc6aQ78XR0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Trappc6aQ78XR0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trappc6aQ78XR0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trappc6aQ78XR0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trappc6aQ78XR0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trappc6aQ78XR0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trappc6aQ78XR0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trappc6aQ78XR0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trappc6aQ78XR0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trappc6aQ78XR0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.1■□□□□ 0.97
Trappc6aQ78XR0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trappc6aQ78XR0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
Trappc6aQ78XR0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.1■□□□□ 0.97
Trappc6aQ78XR0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.09■□□□□ 0.97
Trappc6aQ78XR0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.09■□□□□ 0.97
Trappc6aQ78XR0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trappc6aQ78XR0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trappc6aQ78XR0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trappc6aQ78XR0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trappc6aQ78XR0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
Trappc6aQ78XR0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trappc6aQ78XR0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trappc6aQ78XR0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trappc6aQ78XR0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trappc6aQ78XR0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Trappc6aQ78XR0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trappc6aQ78XR0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trappc6aQ78XR0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trappc6aQ78XR0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms