Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.58■■□□□ 1.05
TUBA1AQ71U36 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.58■■□□□ 1.05
TUBA1AQ71U36 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
TUBA1AQ71U36 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.57■■□□□ 1.04
TUBA1AQ71U36 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA1AQ71U36 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA1AQ71U36 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA1AQ71U36 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA1AQ71U36 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA1AQ71U36 RARRES2P2-201ENST00000394842 485 ntBASIC21.57■■□□□ 1.04
TUBA1AQ71U36 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TUBA1AQ71U36 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.57■■□□□ 1.04
TUBA1AQ71U36 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA1AQ71U36 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.56■■□□□ 1.04
TUBA1AQ71U36 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBA1AQ71U36 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBA1AQ71U36 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBA1AQ71U36 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBA1AQ71U36 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.56■■□□□ 1.04
TUBA1AQ71U36 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TUBA1AQ71U36 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBA1AQ71U36 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBA1AQ71U36 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TUBA1AQ71U36 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.55■■□□□ 1.04
TUBA1AQ71U36 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TUBA1AQ71U36 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.55■■□□□ 1.04
TUBA1AQ71U36 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TUBA1AQ71U36 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TUBA1AQ71U36 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TUBA1AQ71U36 AL359504.2-201ENST00000605506 1601 ntBASIC21.54■■□□□ 1.04
TUBA1AQ71U36 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.53■■□□□ 1.04
TUBA1AQ71U36 LINC01124-201ENST00000409786 2117 ntBASIC21.53■■□□□ 1.04
TUBA1AQ71U36 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
TUBA1AQ71U36 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBA1AQ71U36 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.53■■□□□ 1.04
TUBA1AQ71U36 ECEL1P2-201ENST00000461596 1295 ntBASIC21.53■■□□□ 1.04
TUBA1AQ71U36 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TUBA1AQ71U36 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TUBA1AQ71U36 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TUBA1AQ71U36 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.53■■□□□ 1.04
TUBA1AQ71U36 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.52■■□□□ 1.04
TUBA1AQ71U36 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.52■■□□□ 1.04
TUBA1AQ71U36 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.52■■□□□ 1.04
TUBA1AQ71U36 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TUBA1AQ71U36 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.52■■□□□ 1.04
TUBA1AQ71U36 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TUBA1AQ71U36 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TUBA1AQ71U36 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.52■■□□□ 1.04
TUBA1AQ71U36 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBA1AQ71U36 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TUBA1AQ71U36 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBA1AQ71U36 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.51■■□□□ 1.03
TUBA1AQ71U36 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBA1AQ71U36 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
TUBA1AQ71U36 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TUBA1AQ71U36 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBA1AQ71U36 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TUBA1AQ71U36 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TUBA1AQ71U36 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.51■■□□□ 1.03
TUBA1AQ71U36 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBA1AQ71U36 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBA1AQ71U36 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBA1AQ71U36 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBA1AQ71U36 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBA1AQ71U36 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TUBA1AQ71U36 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBA1AQ71U36 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBA1AQ71U36 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBA1AQ71U36 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBA1AQ71U36 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBA1AQ71U36 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBA1AQ71U36 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBA1AQ71U36 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBA1AQ71U36 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBA1AQ71U36 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.49■■□□□ 1.03
TUBA1AQ71U36 SMPD5-203ENST00000639008 1464 ntBASIC21.49■■□□□ 1.03
TUBA1AQ71U36 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBA1AQ71U36 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBA1AQ71U36 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TUBA1AQ71U36 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
TUBA1AQ71U36 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.48■■□□□ 1.03
TUBA1AQ71U36 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TUBA1AQ71U36 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.48■■□□□ 1.03
TUBA1AQ71U36 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TUBA1AQ71U36 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TUBA1AQ71U36 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TUBA1AQ71U36 DUSP8P5-201ENST00000422884 1815 ntBASIC21.48■■□□□ 1.03
TUBA1AQ71U36 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TUBA1AQ71U36 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.47■■□□□ 1.03
TUBA1AQ71U36 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.47■■□□□ 1.03
TUBA1AQ71U36 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TUBA1AQ71U36 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.47■■□□□ 1.03
TUBA1AQ71U36 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TUBA1AQ71U36 AC096887.2-201ENST00000623443 1957 ntBASIC21.47■■□□□ 1.03
TUBA1AQ71U36 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TUBA1AQ71U36 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TUBA1AQ71U36 AP003733.4-201ENST00000623785 1697 ntBASIC21.46■■□□□ 1.03
TUBA1AQ71U36 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TUBA1AQ71U36 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TUBA1AQ71U36 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms