Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssx9Q6XAS3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssx9Q6XAS3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssx9Q6XAS3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssx9Q6XAS3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssx9Q6XAS3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssx9Q6XAS3 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.23■□□□□ 0.99
Ssx9Q6XAS3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx9Q6XAS3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx9Q6XAS3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx9Q6XAS3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.22■□□□□ 0.99
Ssx9Q6XAS3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx9Q6XAS3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.22■□□□□ 0.99
Ssx9Q6XAS3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.22■□□□□ 0.99
Ssx9Q6XAS3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx9Q6XAS3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssx9Q6XAS3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx9Q6XAS3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx9Q6XAS3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.21■□□□□ 0.99
Ssx9Q6XAS3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.21■□□□□ 0.99
Ssx9Q6XAS3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx9Q6XAS3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx9Q6XAS3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssx9Q6XAS3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ssx9Q6XAS3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.2■□□□□ 0.98
Ssx9Q6XAS3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx9Q6XAS3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx9Q6XAS3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssx9Q6XAS3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Ssx9Q6XAS3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ssx9Q6XAS3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ssx9Q6XAS3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ssx9Q6XAS3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ssx9Q6XAS3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ssx9Q6XAS3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ssx9Q6XAS3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ssx9Q6XAS3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ssx9Q6XAS3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ssx9Q6XAS3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.18■□□□□ 0.98
Ssx9Q6XAS3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ssx9Q6XAS3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.18■□□□□ 0.98
Ssx9Q6XAS3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ssx9Q6XAS3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ssx9Q6XAS3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ssx9Q6XAS3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.17■□□□□ 0.98
Ssx9Q6XAS3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ssx9Q6XAS3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.17■□□□□ 0.98
Ssx9Q6XAS3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ssx9Q6XAS3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ssx9Q6XAS3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ssx9Q6XAS3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ssx9Q6XAS3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.16■□□□□ 0.98
Ssx9Q6XAS3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ssx9Q6XAS3 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.16■□□□□ 0.98
Ssx9Q6XAS3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssx9Q6XAS3 Mir6538-201ENSMUST00000183713 110 ntBASIC21.15■□□□□ 0.98
Ssx9Q6XAS3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ssx9Q6XAS3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssx9Q6XAS3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Ssx9Q6XAS3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ssx9Q6XAS3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ssx9Q6XAS3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Ssx9Q6XAS3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Ssx9Q6XAS3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.14■□□□□ 0.97
Ssx9Q6XAS3 Gm12366-201ENSMUST00000121722 873 ntBASIC21.14■□□□□ 0.97
Ssx9Q6XAS3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.14■□□□□ 0.97
Ssx9Q6XAS3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ssx9Q6XAS3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.14■□□□□ 0.97
Ssx9Q6XAS3 Gm5786-201ENSMUST00000085368 882 ntBASIC21.14■□□□□ 0.97
Ssx9Q6XAS3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ssx9Q6XAS3 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.13■□□□□ 0.97
Ssx9Q6XAS3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssx9Q6XAS3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssx9Q6XAS3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssx9Q6XAS3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssx9Q6XAS3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ssx9Q6XAS3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssx9Q6XAS3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ssx9Q6XAS3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssx9Q6XAS3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssx9Q6XAS3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssx9Q6XAS3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssx9Q6XAS3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ssx9Q6XAS3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.11■□□□□ 0.97
Ssx9Q6XAS3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ssx9Q6XAS3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.11■□□□□ 0.97
Ssx9Q6XAS3 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.11■□□□□ 0.97
Ssx9Q6XAS3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ssx9Q6XAS3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ssx9Q6XAS3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ssx9Q6XAS3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ssx9Q6XAS3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Ssx9Q6XAS3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ssx9Q6XAS3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssx9Q6XAS3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssx9Q6XAS3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ssx9Q6XAS3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssx9Q6XAS3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssx9Q6XAS3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.09■□□□□ 0.97
Ssx9Q6XAS3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms