Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 AC091060.1-201ENST00000623524 1766 ntBASIC26.48■■□□□ 1.83
SWSAP1Q6NVH7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.47■■□□□ 1.83
SWSAP1Q6NVH7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
SWSAP1Q6NVH7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
SWSAP1Q6NVH7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SWSAP1Q6NVH7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
SWSAP1Q6NVH7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.47■■□□□ 1.83
SWSAP1Q6NVH7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.47■■□□□ 1.83
SWSAP1Q6NVH7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.47■■□□□ 1.83
SWSAP1Q6NVH7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SWSAP1Q6NVH7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
SWSAP1Q6NVH7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SWSAP1Q6NVH7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SWSAP1Q6NVH7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.46■■□□□ 1.83
SWSAP1Q6NVH7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
SWSAP1Q6NVH7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
SWSAP1Q6NVH7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SWSAP1Q6NVH7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.46■■□□□ 1.83
SWSAP1Q6NVH7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.45■■□□□ 1.83
SWSAP1Q6NVH7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
SWSAP1Q6NVH7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.45■■□□□ 1.82
SWSAP1Q6NVH7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SWSAP1Q6NVH7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SWSAP1Q6NVH7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SWSAP1Q6NVH7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SWSAP1Q6NVH7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
SWSAP1Q6NVH7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
SWSAP1Q6NVH7 GUSBP5-201ENST00000418136 578 ntBASIC26.44■■□□□ 1.82
SWSAP1Q6NVH7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SWSAP1Q6NVH7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SWSAP1Q6NVH7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SWSAP1Q6NVH7 Z92544.1-202ENST00000571933 1220 ntBASIC26.43■■□□□ 1.82
SWSAP1Q6NVH7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SWSAP1Q6NVH7 DUSP8P4-201ENST00000399538 1761 ntBASIC26.43■■□□□ 1.82
SWSAP1Q6NVH7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.42■■□□□ 1.82
SWSAP1Q6NVH7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SWSAP1Q6NVH7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SWSAP1Q6NVH7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SWSAP1Q6NVH7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SWSAP1Q6NVH7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SWSAP1Q6NVH7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SWSAP1Q6NVH7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SWSAP1Q6NVH7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SWSAP1Q6NVH7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SWSAP1Q6NVH7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.4■■□□□ 1.82
SWSAP1Q6NVH7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SWSAP1Q6NVH7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.4■■□□□ 1.82
SWSAP1Q6NVH7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.4■■□□□ 1.82
SWSAP1Q6NVH7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
SWSAP1Q6NVH7 BX664725.1-201ENST00000438252 379 ntBASIC26.4■■□□□ 1.82
SWSAP1Q6NVH7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.39■■□□□ 1.82
SWSAP1Q6NVH7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
SWSAP1Q6NVH7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SWSAP1Q6NVH7 MIR4281-201ENST00000580852 62 ntBASIC26.39■■□□□ 1.82
SWSAP1Q6NVH7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.39■■□□□ 1.82
SWSAP1Q6NVH7 AC137630.3-201ENST00000607245 391 ntBASIC26.39■■□□□ 1.82
SWSAP1Q6NVH7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.82
SWSAP1Q6NVH7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SWSAP1Q6NVH7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.38■■□□□ 1.81
SWSAP1Q6NVH7 AC145676.1-201ENST00000514988 2004 ntBASIC26.38■■□□□ 1.81
SWSAP1Q6NVH7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.38■■□□□ 1.81
SWSAP1Q6NVH7 AC011551.1-201ENST00000614101 683 ntBASIC26.38■■□□□ 1.81
SWSAP1Q6NVH7 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.38■■□□□ 1.81
SWSAP1Q6NVH7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SWSAP1Q6NVH7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.37■■□□□ 1.81
SWSAP1Q6NVH7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SWSAP1Q6NVH7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SWSAP1Q6NVH7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SWSAP1Q6NVH7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.37■■□□□ 1.81
SWSAP1Q6NVH7 KRT125P-201ENST00000546827 989 ntBASIC26.37■■□□□ 1.81
SWSAP1Q6NVH7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.37■■□□□ 1.81
SWSAP1Q6NVH7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SWSAP1Q6NVH7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.37■■□□□ 1.81
SWSAP1Q6NVH7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SWSAP1Q6NVH7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SWSAP1Q6NVH7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SWSAP1Q6NVH7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SWSAP1Q6NVH7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SWSAP1Q6NVH7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.36■■□□□ 1.81
SWSAP1Q6NVH7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.36■■□□□ 1.81
SWSAP1Q6NVH7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.36■■□□□ 1.81
SWSAP1Q6NVH7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.36■■□□□ 1.81
SWSAP1Q6NVH7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
SWSAP1Q6NVH7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SWSAP1Q6NVH7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SWSAP1Q6NVH7 MIR4787-201ENST00000607364 84 ntBASIC26.35■■□□□ 1.81
SWSAP1Q6NVH7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SWSAP1Q6NVH7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.34■■□□□ 1.81
SWSAP1Q6NVH7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SWSAP1Q6NVH7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SWSAP1Q6NVH7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.34■■□□□ 1.81
SWSAP1Q6NVH7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
SWSAP1Q6NVH7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SWSAP1Q6NVH7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
SWSAP1Q6NVH7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.34■■□□□ 1.81
SWSAP1Q6NVH7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SWSAP1Q6NVH7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SWSAP1Q6NVH7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SWSAP1Q6NVH7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SWSAP1Q6NVH7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms