Protein–RNA interactions for Protein: Q64336

Tbr1, T-box brain protein 1, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbr1Q64336 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.4■□□□□ 0.7
Tbr1Q64336 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tbr1Q64336 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tbr1Q64336 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Tbr1Q64336 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tbr1Q64336 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tbr1Q64336 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tbr1Q64336 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.39■□□□□ 0.69
Tbr1Q64336 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tbr1Q64336 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.39■□□□□ 0.69
Tbr1Q64336 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tbr1Q64336 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tbr1Q64336 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tbr1Q64336 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tbr1Q64336 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tbr1Q64336 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.38■□□□□ 0.69
Tbr1Q64336 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tbr1Q64336 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tbr1Q64336 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tbr1Q64336 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tbr1Q64336 Gm6139-201ENSMUST00000079261 882 ntBASIC19.38■□□□□ 0.69
Tbr1Q64336 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tbr1Q64336 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Tbr1Q64336 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.37■□□□□ 0.69
Tbr1Q64336 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tbr1Q64336 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tbr1Q64336 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tbr1Q64336 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.37■□□□□ 0.69
Tbr1Q64336 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tbr1Q64336 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tbr1Q64336 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.36■□□□□ 0.69
Tbr1Q64336 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.36■□□□□ 0.69
Tbr1Q64336 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tbr1Q64336 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tbr1Q64336 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tbr1Q64336 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.36■□□□□ 0.69
Tbr1Q64336 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.35■□□□□ 0.69
Tbr1Q64336 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tbr1Q64336 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tbr1Q64336 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Tbr1Q64336 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tbr1Q64336 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tbr1Q64336 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tbr1Q64336 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tbr1Q64336 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.34■□□□□ 0.69
Tbr1Q64336 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tbr1Q64336 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tbr1Q64336 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tbr1Q64336 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tbr1Q64336 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tbr1Q64336 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tbr1Q64336 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Tbr1Q64336 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tbr1Q64336 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tbr1Q64336 Gm29257-201ENSMUST00000186115 639 ntBASIC19.33■□□□□ 0.68
Tbr1Q64336 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Tbr1Q64336 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tbr1Q64336 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tbr1Q64336 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tbr1Q64336 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tbr1Q64336 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tbr1Q64336 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tbr1Q64336 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tbr1Q64336 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tbr1Q64336 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tbr1Q64336 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tbr1Q64336 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tbr1Q64336 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tbr1Q64336 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.3■□□□□ 0.68
Tbr1Q64336 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tbr1Q64336 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.3■□□□□ 0.68
Tbr1Q64336 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.29■□□□□ 0.68
Tbr1Q64336 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tbr1Q64336 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Tbr1Q64336 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.29■□□□□ 0.68
Tbr1Q64336 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tbr1Q64336 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tbr1Q64336 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tbr1Q64336 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tbr1Q64336 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tbr1Q64336 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.28■□□□□ 0.68
Tbr1Q64336 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.28■□□□□ 0.68
Tbr1Q64336 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
Tbr1Q64336 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tbr1Q64336 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tbr1Q64336 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tbr1Q64336 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tbr1Q64336 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tbr1Q64336 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Tbr1Q64336 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tbr1Q64336 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Tbr1Q64336 Gm43137-201ENSMUST00000198052 594 ntBASIC19.27■□□□□ 0.68
Tbr1Q64336 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.27■□□□□ 0.68
Tbr1Q64336 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Tbr1Q64336 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tbr1Q64336 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tbr1Q64336 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.26■□□□□ 0.67
Tbr1Q64336 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tbr1Q64336 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.26■□□□□ 0.67
Tbr1Q64336 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms