Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VcanQ62059 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.56■□□□□ 0.88
VcanQ62059 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VcanQ62059 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VcanQ62059 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.55■□□□□ 0.88
VcanQ62059 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.55■□□□□ 0.88
VcanQ62059 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VcanQ62059 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VcanQ62059 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VcanQ62059 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VcanQ62059 Gm43017-201ENSMUST00000198296 752 ntBASIC20.55■□□□□ 0.88
VcanQ62059 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VcanQ62059 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VcanQ62059 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VcanQ62059 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VcanQ62059 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VcanQ62059 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VcanQ62059 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VcanQ62059 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.53■□□□□ 0.88
VcanQ62059 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VcanQ62059 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VcanQ62059 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VcanQ62059 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.52■□□□□ 0.88
VcanQ62059 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VcanQ62059 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
VcanQ62059 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VcanQ62059 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
VcanQ62059 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.51■□□□□ 0.87
VcanQ62059 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VcanQ62059 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.51■□□□□ 0.87
VcanQ62059 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VcanQ62059 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VcanQ62059 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VcanQ62059 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VcanQ62059 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.51■□□□□ 0.87
VcanQ62059 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VcanQ62059 Gm10399-202ENSMUST00000202768 748 ntBASIC20.5■□□□□ 0.87
VcanQ62059 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.5■□□□□ 0.87
VcanQ62059 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VcanQ62059 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.5■□□□□ 0.87
VcanQ62059 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
VcanQ62059 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VcanQ62059 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.49■□□□□ 0.87
VcanQ62059 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.49■□□□□ 0.87
VcanQ62059 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VcanQ62059 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
VcanQ62059 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.49■□□□□ 0.87
VcanQ62059 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VcanQ62059 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.49■□□□□ 0.87
VcanQ62059 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VcanQ62059 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VcanQ62059 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VcanQ62059 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VcanQ62059 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VcanQ62059 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VcanQ62059 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.48■□□□□ 0.87
VcanQ62059 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VcanQ62059 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VcanQ62059 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.47■□□□□ 0.87
VcanQ62059 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VcanQ62059 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
VcanQ62059 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VcanQ62059 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VcanQ62059 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VcanQ62059 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VcanQ62059 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.46■□□□□ 0.87
VcanQ62059 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VcanQ62059 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VcanQ62059 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.46■□□□□ 0.87
VcanQ62059 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VcanQ62059 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VcanQ62059 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VcanQ62059 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VcanQ62059 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VcanQ62059 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
VcanQ62059 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VcanQ62059 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VcanQ62059 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
VcanQ62059 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VcanQ62059 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VcanQ62059 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VcanQ62059 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VcanQ62059 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
VcanQ62059 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VcanQ62059 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VcanQ62059 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VcanQ62059 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
VcanQ62059 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VcanQ62059 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VcanQ62059 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VcanQ62059 Gm42569-201ENSMUST00000200539 472 ntBASIC20.43■□□□□ 0.86
VcanQ62059 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
VcanQ62059 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VcanQ62059 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VcanQ62059 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.43■□□□□ 0.86
VcanQ62059 Gm22325-201ENSMUST00000158904 308 ntBASIC20.43■□□□□ 0.86
VcanQ62059 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.43■□□□□ 0.86
VcanQ62059 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.42■□□□□ 0.86
VcanQ62059 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.42■□□□□ 0.86
VcanQ62059 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms