Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col11a1Q61245 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.66■■□□□ 1.54
Col11a1Q61245 Gm43017-201ENSMUST00000198296 752 ntBASIC24.66■■□□□ 1.54
Col11a1Q61245 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC24.66■■□□□ 1.54
Col11a1Q61245 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col11a1Q61245 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.66■■□□□ 1.54
Col11a1Q61245 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Col11a1Q61245 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col11a1Q61245 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Col11a1Q61245 AC164629.5-201ENSMUST00000220387 632 ntBASIC24.65■■□□□ 1.54
Col11a1Q61245 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col11a1Q61245 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.65■■□□□ 1.54
Col11a1Q61245 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Col11a1Q61245 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Col11a1Q61245 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Col11a1Q61245 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col11a1Q61245 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Col11a1Q61245 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col11a1Q61245 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Col11a1Q61245 Gm6139-201ENSMUST00000079261 882 ntBASIC24.64■■□□□ 1.54
Col11a1Q61245 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Col11a1Q61245 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Col11a1Q61245 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Col11a1Q61245 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC24.63■■□□□ 1.53
Col11a1Q61245 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col11a1Q61245 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col11a1Q61245 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.62■■□□□ 1.53
Col11a1Q61245 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col11a1Q61245 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Col11a1Q61245 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col11a1Q61245 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.62■■□□□ 1.53
Col11a1Q61245 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col11a1Q61245 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col11a1Q61245 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col11a1Q61245 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col11a1Q61245 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col11a1Q61245 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Col11a1Q61245 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
Col11a1Q61245 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col11a1Q61245 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col11a1Q61245 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col11a1Q61245 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col11a1Q61245 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
Col11a1Q61245 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.58■■□□□ 1.53
Col11a1Q61245 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col11a1Q61245 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC24.58■■□□□ 1.53
Col11a1Q61245 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col11a1Q61245 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col11a1Q61245 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Col11a1Q61245 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col11a1Q61245 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col11a1Q61245 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Col11a1Q61245 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col11a1Q61245 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC24.58■■□□□ 1.53
Col11a1Q61245 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col11a1Q61245 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Col11a1Q61245 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
Col11a1Q61245 Gm43137-201ENSMUST00000198052 594 ntBASIC24.57■■□□□ 1.52
Col11a1Q61245 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Col11a1Q61245 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Col11a1Q61245 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Col11a1Q61245 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Col11a1Q61245 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Col11a1Q61245 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Col11a1Q61245 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col11a1Q61245 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col11a1Q61245 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col11a1Q61245 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC24.55■■□□□ 1.52
Col11a1Q61245 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Col11a1Q61245 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Col11a1Q61245 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col11a1Q61245 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.54■■□□□ 1.52
Col11a1Q61245 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col11a1Q61245 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Col11a1Q61245 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col11a1Q61245 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col11a1Q61245 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
Col11a1Q61245 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Col11a1Q61245 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col11a1Q61245 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col11a1Q61245 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.52■■□□□ 1.52
Col11a1Q61245 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Col11a1Q61245 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
Col11a1Q61245 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col11a1Q61245 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col11a1Q61245 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC24.52■■□□□ 1.52
Col11a1Q61245 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col11a1Q61245 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col11a1Q61245 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
Col11a1Q61245 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Col11a1Q61245 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col11a1Q61245 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col11a1Q61245 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col11a1Q61245 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col11a1Q61245 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Col11a1Q61245 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col11a1Q61245 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col11a1Q61245 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Col11a1Q61245 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col11a1Q61245 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms