Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.79■■□□□ 1.4
Cln3Q61124 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.78■■□□□ 1.4
Cln3Q61124 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cln3Q61124 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cln3Q61124 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cln3Q61124 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.77■■□□□ 1.4
Cln3Q61124 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cln3Q61124 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cln3Q61124 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cln3Q61124 Golgb1-201ENSMUST00000023534 498 ntBASIC23.77■■□□□ 1.4
Cln3Q61124 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cln3Q61124 Gm27454-201ENSMUST00000185090 204 ntBASIC23.76■■□□□ 1.39
Cln3Q61124 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
Cln3Q61124 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cln3Q61124 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
Cln3Q61124 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cln3Q61124 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cln3Q61124 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.75■■□□□ 1.39
Cln3Q61124 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.75■■□□□ 1.39
Cln3Q61124 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cln3Q61124 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.75■■□□□ 1.39
Cln3Q61124 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cln3Q61124 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cln3Q61124 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.74■■□□□ 1.39
Cln3Q61124 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.74■■□□□ 1.39
Cln3Q61124 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Cln3Q61124 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cln3Q61124 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cln3Q61124 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.74■■□□□ 1.39
Cln3Q61124 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cln3Q61124 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.72■■□□□ 1.39
Cln3Q61124 Gm45417-201ENSMUST00000209533 758 ntBASIC23.72■■□□□ 1.39
Cln3Q61124 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cln3Q61124 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cln3Q61124 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cln3Q61124 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cln3Q61124 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cln3Q61124 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.71■■□□□ 1.39
Cln3Q61124 Gm12821-201ENSMUST00000120022 600 ntBASIC23.71■■□□□ 1.39
Cln3Q61124 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.71■■□□□ 1.39
Cln3Q61124 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC23.71■■□□□ 1.39
Cln3Q61124 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cln3Q61124 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cln3Q61124 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.39
Cln3Q61124 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Cln3Q61124 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
Cln3Q61124 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Cln3Q61124 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cln3Q61124 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cln3Q61124 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cln3Q61124 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cln3Q61124 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Cln3Q61124 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cln3Q61124 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cln3Q61124 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Cln3Q61124 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Cln3Q61124 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cln3Q61124 Serp2-204ENSMUST00000228055 705 ntBASIC23.68■■□□□ 1.38
Cln3Q61124 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Cln3Q61124 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cln3Q61124 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Cln3Q61124 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Cln3Q61124 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cln3Q61124 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cln3Q61124 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cln3Q61124 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cln3Q61124 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Cln3Q61124 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Cln3Q61124 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Cln3Q61124 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cln3Q61124 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Cln3Q61124 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cln3Q61124 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Cln3Q61124 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cln3Q61124 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Cln3Q61124 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cln3Q61124 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.63■■□□□ 1.37
Cln3Q61124 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.62■■□□□ 1.37
Cln3Q61124 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Cln3Q61124 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cln3Q61124 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cln3Q61124 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cln3Q61124 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cln3Q61124 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Cln3Q61124 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cln3Q61124 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cln3Q61124 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cln3Q61124 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.61■■□□□ 1.37
Cln3Q61124 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.61■■□□□ 1.37
Cln3Q61124 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cln3Q61124 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cln3Q61124 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cln3Q61124 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.6■■□□□ 1.37
Cln3Q61124 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Cln3Q61124 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cln3Q61124 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cln3Q61124 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.59■■□□□ 1.37
Cln3Q61124 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.59■■□□□ 1.37
Cln3Q61124 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cln3Q61124 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms