Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trp53rkaQ5U452 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Trp53rkaQ5U452 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trp53rkaQ5U452 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trp53rkaQ5U452 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trp53rkaQ5U452 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trp53rkaQ5U452 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trp53rkaQ5U452 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trp53rkaQ5U452 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trp53rkaQ5U452 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trp53rkaQ5U452 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trp53rkaQ5U452 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trp53rkaQ5U452 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trp53rkaQ5U452 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.67■□□□□ 0.26
Trp53rkaQ5U452 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trp53rkaQ5U452 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trp53rkaQ5U452 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Trp53rkaQ5U452 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trp53rkaQ5U452 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trp53rkaQ5U452 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trp53rkaQ5U452 Gm30023-201ENSMUST00000197970 889 ntBASIC16.66■□□□□ 0.26
Trp53rkaQ5U452 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trp53rkaQ5U452 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trp53rkaQ5U452 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trp53rkaQ5U452 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trp53rkaQ5U452 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trp53rkaQ5U452 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trp53rkaQ5U452 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trp53rkaQ5U452 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trp53rkaQ5U452 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trp53rkaQ5U452 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.65■□□□□ 0.26
Trp53rkaQ5U452 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trp53rkaQ5U452 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.65■□□□□ 0.26
Trp53rkaQ5U452 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trp53rkaQ5U452 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.65■□□□□ 0.26
Trp53rkaQ5U452 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.65■□□□□ 0.26
Trp53rkaQ5U452 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trp53rkaQ5U452 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trp53rkaQ5U452 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trp53rkaQ5U452 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trp53rkaQ5U452 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.64■□□□□ 0.25
Trp53rkaQ5U452 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trp53rkaQ5U452 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trp53rkaQ5U452 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trp53rkaQ5U452 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trp53rkaQ5U452 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trp53rkaQ5U452 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trp53rkaQ5U452 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trp53rkaQ5U452 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trp53rkaQ5U452 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trp53rkaQ5U452 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trp53rkaQ5U452 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trp53rkaQ5U452 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trp53rkaQ5U452 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trp53rkaQ5U452 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trp53rkaQ5U452 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.62■□□□□ 0.25
Trp53rkaQ5U452 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trp53rkaQ5U452 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trp53rkaQ5U452 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trp53rkaQ5U452 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trp53rkaQ5U452 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trp53rkaQ5U452 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.62■□□□□ 0.25
Trp53rkaQ5U452 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trp53rkaQ5U452 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trp53rkaQ5U452 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trp53rkaQ5U452 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trp53rkaQ5U452 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trp53rkaQ5U452 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trp53rkaQ5U452 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trp53rkaQ5U452 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Trp53rkaQ5U452 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trp53rkaQ5U452 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
Trp53rkaQ5U452 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trp53rkaQ5U452 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.6■□□□□ 0.25
Trp53rkaQ5U452 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trp53rkaQ5U452 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trp53rkaQ5U452 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trp53rkaQ5U452 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trp53rkaQ5U452 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.6■□□□□ 0.25
Trp53rkaQ5U452 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trp53rkaQ5U452 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trp53rkaQ5U452 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Trp53rkaQ5U452 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms