Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.72■□□□□ 0.43
Tmem88bQ3TYP4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.72■□□□□ 0.43
Tmem88bQ3TYP4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tmem88bQ3TYP4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmem88bQ3TYP4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tmem88bQ3TYP4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.72■□□□□ 0.43
Tmem88bQ3TYP4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Tmem88bQ3TYP4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmem88bQ3TYP4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tmem88bQ3TYP4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.71■□□□□ 0.43
Tmem88bQ3TYP4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tmem88bQ3TYP4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.71■□□□□ 0.42
Tmem88bQ3TYP4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tmem88bQ3TYP4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.71■□□□□ 0.42
Tmem88bQ3TYP4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tmem88bQ3TYP4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tmem88bQ3TYP4 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.7■□□□□ 0.42
Tmem88bQ3TYP4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.7■□□□□ 0.42
Tmem88bQ3TYP4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.7■□□□□ 0.42
Tmem88bQ3TYP4 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.7■□□□□ 0.42
Tmem88bQ3TYP4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tmem88bQ3TYP4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem88bQ3TYP4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem88bQ3TYP4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem88bQ3TYP4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.69■□□□□ 0.42
Tmem88bQ3TYP4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem88bQ3TYP4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.69■□□□□ 0.42
Tmem88bQ3TYP4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem88bQ3TYP4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem88bQ3TYP4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem88bQ3TYP4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.68■□□□□ 0.42
Tmem88bQ3TYP4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tmem88bQ3TYP4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem88bQ3TYP4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tmem88bQ3TYP4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem88bQ3TYP4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem88bQ3TYP4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem88bQ3TYP4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem88bQ3TYP4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem88bQ3TYP4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tmem88bQ3TYP4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem88bQ3TYP4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Tmem88bQ3TYP4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.67■□□□□ 0.42
Tmem88bQ3TYP4 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.67■□□□□ 0.42
Tmem88bQ3TYP4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem88bQ3TYP4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Tmem88bQ3TYP4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.67■□□□□ 0.42
Tmem88bQ3TYP4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.66■□□□□ 0.42
Tmem88bQ3TYP4 Gm8495-201ENSMUST00000188740 694 ntBASIC17.66■□□□□ 0.42
Tmem88bQ3TYP4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem88bQ3TYP4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tmem88bQ3TYP4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Tmem88bQ3TYP4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem88bQ3TYP4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem88bQ3TYP4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem88bQ3TYP4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem88bQ3TYP4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem88bQ3TYP4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem88bQ3TYP4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem88bQ3TYP4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem88bQ3TYP4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem88bQ3TYP4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem88bQ3TYP4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem88bQ3TYP4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem88bQ3TYP4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tmem88bQ3TYP4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tmem88bQ3TYP4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tmem88bQ3TYP4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Tmem88bQ3TYP4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tmem88bQ3TYP4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Tmem88bQ3TYP4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tmem88bQ3TYP4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tmem88bQ3TYP4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Tmem88bQ3TYP4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tmem88bQ3TYP4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.64■□□□□ 0.41
Tmem88bQ3TYP4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.63■□□□□ 0.41
Tmem88bQ3TYP4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tmem88bQ3TYP4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tmem88bQ3TYP4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.63■□□□□ 0.41
Tmem88bQ3TYP4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tmem88bQ3TYP4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tmem88bQ3TYP4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Tmem88bQ3TYP4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tmem88bQ3TYP4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem88bQ3TYP4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem88bQ3TYP4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem88bQ3TYP4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tmem88bQ3TYP4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Tmem88bQ3TYP4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem88bQ3TYP4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem88bQ3TYP4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tmem88bQ3TYP4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tmem88bQ3TYP4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Tmem88bQ3TYP4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmem88bQ3TYP4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Tmem88bQ3TYP4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.61■□□□□ 0.41
Tmem88bQ3TYP4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Tmem88bQ3TYP4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmem88bQ3TYP4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmem88bQ3TYP4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms