Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CLDN18P56856 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN18P56856 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CLDN18P56856 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
CLDN18P56856 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN18P56856 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CLDN18P56856 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.21■□□□□ 0.99
CLDN18P56856 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.21■□□□□ 0.99
CLDN18P56856 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CLDN18P56856 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN18P56856 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN18P56856 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN18P56856 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN18P56856 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CLDN18P56856 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
CLDN18P56856 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN18P56856 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN18P56856 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.2■□□□□ 0.98
CLDN18P56856 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.2■□□□□ 0.98
CLDN18P56856 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.2■□□□□ 0.98
CLDN18P56856 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN18P56856 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN18P56856 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN18P56856 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN18P56856 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN18P56856 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.18■□□□□ 0.98
CLDN18P56856 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CLDN18P56856 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN18P56856 AC011551.1-201ENST00000614101 683 ntBASIC21.18■□□□□ 0.98
CLDN18P56856 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CLDN18P56856 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CLDN18P56856 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
CLDN18P56856 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CLDN18P56856 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN18P56856 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN18P56856 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CLDN18P56856 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.16■□□□□ 0.98
CLDN18P56856 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN18P56856 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN18P56856 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN18P56856 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN18P56856 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.16■□□□□ 0.98
CLDN18P56856 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.16■□□□□ 0.98
CLDN18P56856 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.16■□□□□ 0.98
CLDN18P56856 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.16■□□□□ 0.98
CLDN18P56856 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.16■□□□□ 0.98
CLDN18P56856 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN18P56856 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN18P56856 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN18P56856 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.15■□□□□ 0.98
CLDN18P56856 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.15■□□□□ 0.98
CLDN18P56856 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.15■□□□□ 0.98
CLDN18P56856 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN18P56856 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.15■□□□□ 0.98
CLDN18P56856 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CLDN18P56856 Z92544.1-202ENST00000571933 1220 ntBASIC21.15■□□□□ 0.98
CLDN18P56856 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN18P56856 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN18P56856 MIR4281-201ENST00000580852 62 ntBASIC21.14■□□□□ 0.97
CLDN18P56856 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CLDN18P56856 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN18P56856 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN18P56856 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN18P56856 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN18P56856 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN18P56856 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN18P56856 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN18P56856 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CLDN18P56856 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN18P56856 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN18P56856 AC239859.2-201ENST00000444165 318 ntBASIC21.13■□□□□ 0.97
CLDN18P56856 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN18P56856 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.12■□□□□ 0.97
CLDN18P56856 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN18P56856 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN18P56856 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CLDN18P56856 GUSBP5-201ENST00000418136 578 ntBASIC21.12■□□□□ 0.97
CLDN18P56856 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.12■□□□□ 0.97
CLDN18P56856 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN18P56856 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN18P56856 AC137630.3-201ENST00000607245 391 ntBASIC21.12■□□□□ 0.97
CLDN18P56856 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.12■□□□□ 0.97
CLDN18P56856 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN18P56856 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN18P56856 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN18P56856 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN18P56856 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN18P56856 BX664725.1-201ENST00000438252 379 ntBASIC21.11■□□□□ 0.97
CLDN18P56856 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN18P56856 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN18P56856 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.1■□□□□ 0.97
CLDN18P56856 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.1■□□□□ 0.97
CLDN18P56856 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.1■□□□□ 0.97
CLDN18P56856 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN18P56856 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.1■□□□□ 0.97
CLDN18P56856 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.1■□□□□ 0.97
CLDN18P56856 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.09■□□□□ 0.97
CLDN18P56856 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.09■□□□□ 0.97
CLDN18P56856 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.09■□□□□ 0.97
CLDN18P56856 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms