Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB5CP51148 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB5CP51148 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB5CP51148 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB5CP51148 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.92■□□□□ 0.62
RAB5CP51148 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB5CP51148 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB5CP51148 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB5CP51148 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
RAB5CP51148 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5CP51148 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5CP51148 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5CP51148 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RAB5CP51148 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5CP51148 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5CP51148 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5CP51148 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5CP51148 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB5CP51148 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB5CP51148 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB5CP51148 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RAB5CP51148 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RAB5CP51148 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB5CP51148 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB5CP51148 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB5CP51148 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB5CP51148 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB5CP51148 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB5CP51148 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB5CP51148 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB5CP51148 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB5CP51148 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB5CP51148 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB5CP51148 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB5CP51148 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.89■□□□□ 0.62
RAB5CP51148 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB5CP51148 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RAB5CP51148 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.89■□□□□ 0.61
RAB5CP51148 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB5CP51148 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB5CP51148 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RAB5CP51148 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RAB5CP51148 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB5CP51148 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.88■□□□□ 0.61
RAB5CP51148 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB5CP51148 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB5CP51148 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB5CP51148 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAB5CP51148 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB5CP51148 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB5CP51148 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RAB5CP51148 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RAB5CP51148 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RAB5CP51148 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB5CP51148 AC004812.2-201ENST00000611079 2094 ntBASIC18.86■□□□□ 0.61
RAB5CP51148 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB5CP51148 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB5CP51148 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB5CP51148 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB5CP51148 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB5CP51148 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RAB5CP51148 C9orf163-202ENST00000624034 2573 ntBASIC18.86■□□□□ 0.61
RAB5CP51148 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB5CP51148 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
RAB5CP51148 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RAB5CP51148 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.85■□□□□ 0.61
RAB5CP51148 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB5CP51148 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB5CP51148 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB5CP51148 SLC6A10P-202ENST00000431994 2058 ntBASIC18.85■□□□□ 0.61
RAB5CP51148 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB5CP51148 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB5CP51148 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB5CP51148 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB5CP51148 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB5CP51148 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB5CP51148 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB5CP51148 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
RAB5CP51148 LINC00565-201ENST00000562710 2331 ntBASIC18.84■□□□□ 0.61
RAB5CP51148 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
RAB5CP51148 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB5CP51148 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB5CP51148 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB5CP51148 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAB5CP51148 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAB5CP51148 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB5CP51148 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB5CP51148 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RAB5CP51148 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB5CP51148 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB5CP51148 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB5CP51148 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB5CP51148 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB5CP51148 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB5CP51148 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB5CP51148 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB5CP51148 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB5CP51148 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RAB5CP51148 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RAB5CP51148 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms