Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-6P43688 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-6P43688 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-6P43688 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Nkx2-6P43688 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-6P43688 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-6P43688 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Nkx2-6P43688 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-6P43688 Gm22238-201ENSMUST00000175222 88 ntBASIC20.18■□□□□ 0.82
Nkx2-6P43688 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-6P43688 Gm13241-201ENSMUST00000094493 780 ntBASIC20.18■□□□□ 0.82
Nkx2-6P43688 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-6P43688 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Nkx2-6P43688 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-6P43688 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.17■□□□□ 0.82
Nkx2-6P43688 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-6P43688 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-6P43688 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-6P43688 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.17■□□□□ 0.82
Nkx2-6P43688 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-6P43688 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-6P43688 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-6P43688 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nkx2-6P43688 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.17■□□□□ 0.82
Nkx2-6P43688 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.16■□□□□ 0.82
Nkx2-6P43688 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nkx2-6P43688 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-6P43688 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.15■□□□□ 0.82
Nkx2-6P43688 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nkx2-6P43688 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx2-6P43688 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.14■□□□□ 0.81
Nkx2-6P43688 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nkx2-6P43688 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx2-6P43688 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.14■□□□□ 0.81
Nkx2-6P43688 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Nkx2-6P43688 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx2-6P43688 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-6P43688 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-6P43688 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-6P43688 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-6P43688 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Nkx2-6P43688 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Nkx2-6P43688 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.13■□□□□ 0.81
Nkx2-6P43688 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-6P43688 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-6P43688 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-6P43688 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx2-6P43688 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx2-6P43688 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx2-6P43688 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Nkx2-6P43688 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx2-6P43688 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx2-6P43688 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx2-6P43688 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nkx2-6P43688 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx2-6P43688 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx2-6P43688 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.11■□□□□ 0.81
Nkx2-6P43688 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Nkx2-6P43688 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.11■□□□□ 0.81
Nkx2-6P43688 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx2-6P43688 Gm12922-201ENSMUST00000120626 809 ntBASIC20.11■□□□□ 0.81
Nkx2-6P43688 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx2-6P43688 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Nkx2-6P43688 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx2-6P43688 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx2-6P43688 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx2-6P43688 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx2-6P43688 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx2-6P43688 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.1■□□□□ 0.81
Nkx2-6P43688 Gm9847-201ENSMUST00000052528 599 ntBASIC20.1■□□□□ 0.81
Nkx2-6P43688 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx2-6P43688 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx2-6P43688 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx2-6P43688 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx2-6P43688 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Nkx2-6P43688 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx2-6P43688 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Nkx2-6P43688 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx2-6P43688 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx2-6P43688 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Nkx2-6P43688 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx2-6P43688 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.09■□□□□ 0.81
Nkx2-6P43688 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx2-6P43688 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms