Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fen1P39749 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fen1P39749 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Fen1P39749 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fen1P39749 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Fen1P39749 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fen1P39749 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fen1P39749 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fen1P39749 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fen1P39749 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.25■□□□□ 0.99
Fen1P39749 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Fen1P39749 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.25■□□□□ 0.99
Fen1P39749 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Fen1P39749 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.25■□□□□ 0.99
Fen1P39749 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Fen1P39749 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Fen1P39749 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fen1P39749 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.24■□□□□ 0.99
Fen1P39749 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Fen1P39749 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fen1P39749 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fen1P39749 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Fen1P39749 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fen1P39749 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fen1P39749 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Fen1P39749 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.23■□□□□ 0.99
Fen1P39749 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
Fen1P39749 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Fen1P39749 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Fen1P39749 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.23■□□□□ 0.99
Fen1P39749 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Fen1P39749 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Fen1P39749 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Fen1P39749 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.22■□□□□ 0.99
Fen1P39749 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fen1P39749 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fen1P39749 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fen1P39749 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.22■□□□□ 0.99
Fen1P39749 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fen1P39749 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Fen1P39749 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fen1P39749 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.21■□□□□ 0.99
Fen1P39749 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fen1P39749 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fen1P39749 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Fen1P39749 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.2■□□□□ 0.98
Fen1P39749 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.2■□□□□ 0.98
Fen1P39749 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fen1P39749 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.2■□□□□ 0.98
Fen1P39749 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Fen1P39749 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Fen1P39749 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fen1P39749 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fen1P39749 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fen1P39749 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fen1P39749 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.19■□□□□ 0.98
Fen1P39749 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fen1P39749 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fen1P39749 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Fen1P39749 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Fen1P39749 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Fen1P39749 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Fen1P39749 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fen1P39749 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Fen1P39749 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Fen1P39749 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fen1P39749 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Fen1P39749 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.17■□□□□ 0.98
Fen1P39749 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.17■□□□□ 0.98
Fen1P39749 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fen1P39749 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fen1P39749 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fen1P39749 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Fen1P39749 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Fen1P39749 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Fen1P39749 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Fen1P39749 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Fen1P39749 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Fen1P39749 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Fen1P39749 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Fen1P39749 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Fen1P39749 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Fen1P39749 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Fen1P39749 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Fen1P39749 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Fen1P39749 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Fen1P39749 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Fen1P39749 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Fen1P39749 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Fen1P39749 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Fen1P39749 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Fen1P39749 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Fen1P39749 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Fen1P39749 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Fen1P39749 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.14■□□□□ 0.97
Fen1P39749 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Fen1P39749 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fen1P39749 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fen1P39749 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.13■□□□□ 0.97
Fen1P39749 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms