Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDKN1AP38936 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDKN1AP38936 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDKN1AP38936 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDKN1AP38936 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CDKN1AP38936 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CDKN1AP38936 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.14■□□□□ 0.81
CDKN1AP38936 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.14■□□□□ 0.81
CDKN1AP38936 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDKN1AP38936 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDKN1AP38936 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDKN1AP38936 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.13■□□□□ 0.81
CDKN1AP38936 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDKN1AP38936 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.13■□□□□ 0.81
CDKN1AP38936 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKN1AP38936 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.12■□□□□ 0.81
CDKN1AP38936 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKN1AP38936 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.12■□□□□ 0.81
CDKN1AP38936 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.12■□□□□ 0.81
CDKN1AP38936 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDKN1AP38936 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKN1AP38936 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKN1AP38936 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKN1AP38936 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CDKN1AP38936 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.11■□□□□ 0.81
CDKN1AP38936 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKN1AP38936 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CDKN1AP38936 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDKN1AP38936 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.1■□□□□ 0.81
CDKN1AP38936 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKN1AP38936 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKN1AP38936 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKN1AP38936 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.1■□□□□ 0.81
CDKN1AP38936 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.1■□□□□ 0.81
CDKN1AP38936 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.1■□□□□ 0.81
CDKN1AP38936 MTDHP2-201ENST00000601468 714 ntBASIC20.1■□□□□ 0.81
CDKN1AP38936 AC011551.1-201ENST00000614101 683 ntBASIC20.1■□□□□ 0.81
CDKN1AP38936 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKN1AP38936 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKN1AP38936 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CDKN1AP38936 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN1AP38936 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.09■□□□□ 0.81
CDKN1AP38936 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN1AP38936 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.09■□□□□ 0.81
CDKN1AP38936 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.09■□□□□ 0.81
CDKN1AP38936 AC010997.5-201ENST00000609182 354 ntBASIC20.09■□□□□ 0.81
CDKN1AP38936 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.09■□□□□ 0.81
CDKN1AP38936 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CDKN1AP38936 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN1AP38936 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN1AP38936 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKN1AP38936 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.08■□□□□ 0.81
CDKN1AP38936 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDKN1AP38936 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.08■□□□□ 0.8
CDKN1AP38936 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.07■□□□□ 0.8
CDKN1AP38936 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN1AP38936 AC131281.2-201ENST00000520478 145 ntBASIC20.07■□□□□ 0.8
CDKN1AP38936 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CDKN1AP38936 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN1AP38936 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN1AP38936 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN1AP38936 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN1AP38936 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.07■□□□□ 0.8
CDKN1AP38936 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CDKN1AP38936 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN1AP38936 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN1AP38936 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN1AP38936 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN1AP38936 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN1AP38936 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.06■□□□□ 0.8
CDKN1AP38936 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN1AP38936 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.06■□□□□ 0.8
CDKN1AP38936 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CDKN1AP38936 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKN1AP38936 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.06■□□□□ 0.8
CDKN1AP38936 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN1AP38936 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN1AP38936 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.05■□□□□ 0.8
CDKN1AP38936 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKN1AP38936 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CDKN1AP38936 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKN1AP38936 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CDKN1AP38936 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.05■□□□□ 0.8
CDKN1AP38936 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CDKN1AP38936 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.05■□□□□ 0.8
CDKN1AP38936 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.05■□□□□ 0.8
CDKN1AP38936 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.05■□□□□ 0.8
CDKN1AP38936 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDKN1AP38936 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CDKN1AP38936 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.04■□□□□ 0.8
CDKN1AP38936 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.04■□□□□ 0.8
CDKN1AP38936 AL117332.1-201ENST00000622628 974 ntBASIC20.04■□□□□ 0.8
CDKN1AP38936 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.04■□□□□ 0.8
CDKN1AP38936 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.04■□□□□ 0.8
CDKN1AP38936 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.04■□□□□ 0.8
CDKN1AP38936 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKN1AP38936 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN1AP38936 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN1AP38936 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.03■□□□□ 0.8
CDKN1AP38936 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms