Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Sftpa1P35242 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.85■□□□□ 0.77
Sftpa1P35242 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sftpa1P35242 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sftpa1P35242 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sftpa1P35242 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sftpa1P35242 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sftpa1P35242 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sftpa1P35242 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sftpa1P35242 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sftpa1P35242 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.84■□□□□ 0.77
Sftpa1P35242 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sftpa1P35242 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sftpa1P35242 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sftpa1P35242 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sftpa1P35242 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sftpa1P35242 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Sftpa1P35242 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.83■□□□□ 0.77
Sftpa1P35242 Gm8495-201ENSMUST00000188740 694 ntBASIC19.83■□□□□ 0.77
Sftpa1P35242 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Sftpa1P35242 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Sftpa1P35242 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Sftpa1P35242 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sftpa1P35242 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sftpa1P35242 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sftpa1P35242 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sftpa1P35242 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sftpa1P35242 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sftpa1P35242 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.82■□□□□ 0.76
Sftpa1P35242 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sftpa1P35242 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.82■□□□□ 0.76
Sftpa1P35242 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Sftpa1P35242 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sftpa1P35242 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sftpa1P35242 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sftpa1P35242 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sftpa1P35242 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sftpa1P35242 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.81■□□□□ 0.76
Sftpa1P35242 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sftpa1P35242 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.81■□□□□ 0.76
Sftpa1P35242 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sftpa1P35242 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sftpa1P35242 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.8■□□□□ 0.76
Sftpa1P35242 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sftpa1P35242 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sftpa1P35242 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Sftpa1P35242 Gm18284-201ENSMUST00000172604 624 ntBASIC19.8■□□□□ 0.76
Sftpa1P35242 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sftpa1P35242 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sftpa1P35242 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sftpa1P35242 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.79■□□□□ 0.76
Sftpa1P35242 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Sftpa1P35242 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sftpa1P35242 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sftpa1P35242 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sftpa1P35242 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sftpa1P35242 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Sftpa1P35242 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sftpa1P35242 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sftpa1P35242 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sftpa1P35242 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.78■□□□□ 0.76
Sftpa1P35242 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sftpa1P35242 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.77■□□□□ 0.76
Sftpa1P35242 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sftpa1P35242 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sftpa1P35242 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sftpa1P35242 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sftpa1P35242 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sftpa1P35242 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sftpa1P35242 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Sftpa1P35242 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.76■□□□□ 0.75
Sftpa1P35242 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.76■□□□□ 0.75
Sftpa1P35242 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.76■□□□□ 0.75
Sftpa1P35242 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.76■□□□□ 0.75
Sftpa1P35242 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sftpa1P35242 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sftpa1P35242 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.76■□□□□ 0.75
Sftpa1P35242 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sftpa1P35242 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sftpa1P35242 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sftpa1P35242 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.75■□□□□ 0.75
Sftpa1P35242 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sftpa1P35242 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sftpa1P35242 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sftpa1P35242 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sftpa1P35242 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.74■□□□□ 0.75
Sftpa1P35242 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sftpa1P35242 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sftpa1P35242 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sftpa1P35242 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sftpa1P35242 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sftpa1P35242 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sftpa1P35242 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sftpa1P35242 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sftpa1P35242 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sftpa1P35242 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sftpa1P35242 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sftpa1P35242 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sftpa1P35242 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.72■□□□□ 0.75
Sftpa1P35242 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms