Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.87■□□□□ 0.93
HOXC12P31275 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC12P31275 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXC12P31275 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.86■□□□□ 0.93
HOXC12P31275 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC12P31275 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC12P31275 AC019171.1-201ENST00000601251 1056 ntBASIC20.86■□□□□ 0.93
HOXC12P31275 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC12P31275 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC12P31275 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.86■□□□□ 0.93
HOXC12P31275 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXC12P31275 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HOXC12P31275 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HOXC12P31275 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC12P31275 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC12P31275 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.85■□□□□ 0.93
HOXC12P31275 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.85■□□□□ 0.93
HOXC12P31275 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC12P31275 ERN1-208ENST00000606895 2068 ntBASIC20.85■□□□□ 0.93
HOXC12P31275 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC12P31275 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC12P31275 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC12P31275 LONRF2P2-201ENST00000439212 571 ntBASIC20.84■□□□□ 0.93
HOXC12P31275 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXC12P31275 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXC12P31275 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HOXC12P31275 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC12P31275 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC12P31275 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.83■□□□□ 0.93
HOXC12P31275 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXC12P31275 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC12P31275 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HOXC12P31275 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
HOXC12P31275 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HOXC12P31275 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
HOXC12P31275 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.82■□□□□ 0.92
HOXC12P31275 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC12P31275 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC12P31275 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC12P31275 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HOXC12P31275 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC12P31275 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC12P31275 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HOXC12P31275 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC12P31275 AC022616.5-201ENST00000518796 181 ntBASIC20.81■□□□□ 0.92
HOXC12P31275 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC12P31275 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC12P31275 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HOXC12P31275 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC12P31275 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC12P31275 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXC12P31275 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXC12P31275 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC12P31275 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HOXC12P31275 AC239859.2-201ENST00000444165 318 ntBASIC20.8■□□□□ 0.92
HOXC12P31275 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.8■□□□□ 0.92
HOXC12P31275 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.8■□□□□ 0.92
HOXC12P31275 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.8■□□□□ 0.92
HOXC12P31275 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC12P31275 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC12P31275 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC12P31275 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
HOXC12P31275 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC12P31275 AC008406.3-201ENST00000620001 1374 ntBASIC20.79■□□□□ 0.92
HOXC12P31275 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC12P31275 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC12P31275 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC12P31275 AC097639.1-201ENST00000565519 1891 ntBASIC20.79■□□□□ 0.92
HOXC12P31275 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC12P31275 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.78■□□□□ 0.92
HOXC12P31275 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC12P31275 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC12P31275 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC12P31275 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
HOXC12P31275 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC12P31275 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HOXC12P31275 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.78■□□□□ 0.92
HOXC12P31275 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC12P31275 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.78■□□□□ 0.92
HOXC12P31275 AC096887.2-201ENST00000623443 1957 ntBASIC20.77■□□□□ 0.92
HOXC12P31275 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC12P31275 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC12P31275 AC145676.1-201ENST00000514988 2004 ntBASIC20.77■□□□□ 0.92
HOXC12P31275 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC12P31275 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXC12P31275 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.77■□□□□ 0.92
HOXC12P31275 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC12P31275 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC12P31275 Z92544.1-202ENST00000571933 1220 ntBASIC20.76■□□□□ 0.91
HOXC12P31275 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.76■□□□□ 0.91
HOXC12P31275 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.76■□□□□ 0.91
HOXC12P31275 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC12P31275 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC12P31275 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC12P31275 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC12P31275 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
HOXC12P31275 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXC12P31275 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXC12P31275 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC12P31275 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms