Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.79■□□□□ 0.44
Tnfrsf1aP25118 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf1aP25118 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf1aP25118 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf1aP25118 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf1aP25118 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf1aP25118 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.78■□□□□ 0.44
Tnfrsf1aP25118 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1aP25118 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tnfrsf1aP25118 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1aP25118 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1aP25118 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.78■□□□□ 0.44
Tnfrsf1aP25118 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1aP25118 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.78■□□□□ 0.44
Tnfrsf1aP25118 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1aP25118 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1aP25118 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1aP25118 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1aP25118 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf1aP25118 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1aP25118 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1aP25118 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1aP25118 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1aP25118 Gm14523-201ENSMUST00000117260 558 ntBASIC17.77■□□□□ 0.44
Tnfrsf1aP25118 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.77■□□□□ 0.44
Tnfrsf1aP25118 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1aP25118 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1aP25118 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1aP25118 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf1aP25118 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Tnfrsf1aP25118 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Tnfrsf1aP25118 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tnfrsf1aP25118 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tnfrsf1aP25118 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1aP25118 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Tnfrsf1aP25118 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1aP25118 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1aP25118 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1aP25118 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1aP25118 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.76■□□□□ 0.43
Tnfrsf1aP25118 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.76■□□□□ 0.43
Tnfrsf1aP25118 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1aP25118 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1aP25118 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1aP25118 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf1aP25118 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Gm7332-201ENSMUST00000118351 454 ntBASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf1aP25118 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf1aP25118 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.74■□□□□ 0.43
Tnfrsf1aP25118 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Tnfrsf1aP25118 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf1aP25118 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf1aP25118 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1aP25118 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1aP25118 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.73■□□□□ 0.43
Tnfrsf1aP25118 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1aP25118 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf1aP25118 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.73■□□□□ 0.43
Tnfrsf1aP25118 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf1aP25118 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf1aP25118 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf1aP25118 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf1aP25118 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf1aP25118 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf1aP25118 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.72■□□□□ 0.43
Tnfrsf1aP25118 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf1aP25118 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf1aP25118 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf1aP25118 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf1aP25118 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf1aP25118 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1aP25118 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1aP25118 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf1aP25118 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1aP25118 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
Tnfrsf1aP25118 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1aP25118 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1aP25118 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1aP25118 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1aP25118 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf1aP25118 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1aP25118 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tnfrsf1aP25118 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Tnfrsf1aP25118 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.71■□□□□ 0.42
Tnfrsf1aP25118 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Tnfrsf1aP25118 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf1aP25118 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms