Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.34■□□□□ 0.85
APCP25054 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APCP25054 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
APCP25054 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.84
APCP25054 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.33■□□□□ 0.84
APCP25054 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
APCP25054 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
APCP25054 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
APCP25054 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.32■□□□□ 0.84
APCP25054 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APCP25054 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.32■□□□□ 0.84
APCP25054 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.32■□□□□ 0.84
APCP25054 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.32■□□□□ 0.84
APCP25054 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
APCP25054 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
APCP25054 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.32■□□□□ 0.84
APCP25054 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APCP25054 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APCP25054 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APCP25054 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
APCP25054 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
APCP25054 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.31■□□□□ 0.84
APCP25054 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.31■□□□□ 0.84
APCP25054 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.31■□□□□ 0.84
APCP25054 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APCP25054 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
APCP25054 ID1-201ENST00000376105 1233 ntBASIC20.3■□□□□ 0.84
APCP25054 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.3■□□□□ 0.84
APCP25054 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APCP25054 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APCP25054 AC022517.1-201ENST00000592429 346 ntBASIC20.3■□□□□ 0.84
APCP25054 BX255925.1-201ENST00000566954 1854 ntBASIC20.3■□□□□ 0.84
APCP25054 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.29■□□□□ 0.84
APCP25054 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.29■□□□□ 0.84
APCP25054 IKBKGP1-201ENST00000612193 1073 ntBASIC20.29■□□□□ 0.84
APCP25054 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APCP25054 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.29■□□□□ 0.84
APCP25054 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
APCP25054 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APCP25054 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APCP25054 AC034268.1-201ENST00000441047 882 ntBASIC20.28■□□□□ 0.84
APCP25054 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.28■□□□□ 0.84
APCP25054 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.28■□□□□ 0.84
APCP25054 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.28■□□□□ 0.84
APCP25054 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APCP25054 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
APCP25054 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
APCP25054 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.28■□□□□ 0.84
APCP25054 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APCP25054 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.27■□□□□ 0.84
APCP25054 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.27■□□□□ 0.84
APCP25054 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
APCP25054 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.27■□□□□ 0.84
APCP25054 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
APCP25054 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APCP25054 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
APCP25054 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
APCP25054 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
APCP25054 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.26■□□□□ 0.83
APCP25054 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.26■□□□□ 0.83
APCP25054 SNX5-217ENST00000606557 1087 ntBASIC20.26■□□□□ 0.83
APCP25054 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APCP25054 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.26■□□□□ 0.83
APCP25054 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.26■□□□□ 0.83
APCP25054 CA15P2-201ENST00000611168 834 ntBASIC20.26■□□□□ 0.83
APCP25054 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APCP25054 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APCP25054 ESRRAP2-201ENST00000418437 1549 ntBASIC20.25■□□□□ 0.83
APCP25054 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
APCP25054 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.25■□□□□ 0.83
APCP25054 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.25■□□□□ 0.83
APCP25054 SRD5A1P1-201ENST00000442297 786 ntBASIC20.25■□□□□ 0.83
APCP25054 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.25■□□□□ 0.83
APCP25054 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
APCP25054 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.24■□□□□ 0.83
APCP25054 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APCP25054 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
APCP25054 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.24■□□□□ 0.83
APCP25054 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
APCP25054 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.23■□□□□ 0.83
APCP25054 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
APCP25054 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.23■□□□□ 0.83
APCP25054 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.23■□□□□ 0.83
APCP25054 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APCP25054 IRS3P-201ENST00000223076 1006 ntBASIC20.22■□□□□ 0.83
APCP25054 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APCP25054 AC092437.1-201ENST00000624794 1048 ntBASIC20.22■□□□□ 0.83
APCP25054 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
APCP25054 AL449106.1-201ENST00000608517 1980 ntBASIC20.22■□□□□ 0.83
APCP25054 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.22■□□□□ 0.83
APCP25054 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
APCP25054 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APCP25054 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APCP25054 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
APCP25054 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.21■□□□□ 0.83
APCP25054 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APCP25054 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.21■□□□□ 0.83
APCP25054 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.21■□□□□ 0.83
APCP25054 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
APCP25054 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms