Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CXCL3P19876 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.84■□□□□ 0.77
CXCL3P19876 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CXCL3P19876 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCL3P19876 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.84■□□□□ 0.77
CXCL3P19876 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CXCL3P19876 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CXCL3P19876 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CXCL3P19876 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CXCL3P19876 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CXCL3P19876 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.83■□□□□ 0.77
CXCL3P19876 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CXCL3P19876 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CXCL3P19876 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.82■□□□□ 0.76
CXCL3P19876 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CXCL3P19876 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CXCL3P19876 C1orf229-201ENST00000623686 2258 ntBASIC19.82■□□□□ 0.76
CXCL3P19876 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CXCL3P19876 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.82■□□□□ 0.76
CXCL3P19876 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CXCL3P19876 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.82■□□□□ 0.76
CXCL3P19876 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.82■□□□□ 0.76
CXCL3P19876 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CXCL3P19876 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CXCL3P19876 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CXCL3P19876 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL3P19876 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL3P19876 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL3P19876 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL3P19876 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL3P19876 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CXCL3P19876 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL3P19876 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL3P19876 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CXCL3P19876 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CXCL3P19876 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CXCL3P19876 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CXCL3P19876 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CXCL3P19876 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CXCL3P19876 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
CXCL3P19876 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.8■□□□□ 0.76
CXCL3P19876 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CXCL3P19876 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CXCL3P19876 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.79■□□□□ 0.76
CXCL3P19876 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCL3P19876 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CXCL3P19876 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCL3P19876 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCL3P19876 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCL3P19876 LINC00273-201ENST00000539813 1452 ntBASIC19.79■□□□□ 0.76
CXCL3P19876 AC007375.3-201ENST00000600936 2314 ntBASIC19.79■□□□□ 0.76
CXCL3P19876 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCL3P19876 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCL3P19876 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CXCL3P19876 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.78■□□□□ 0.76
CXCL3P19876 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.78■□□□□ 0.76
CXCL3P19876 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CXCL3P19876 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CXCL3P19876 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCL3P19876 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.77■□□□□ 0.76
CXCL3P19876 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CXCL3P19876 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CXCL3P19876 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.77■□□□□ 0.76
CXCL3P19876 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.77■□□□□ 0.76
CXCL3P19876 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CXCL3P19876 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CXCL3P19876 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CXCL3P19876 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CXCL3P19876 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.76■□□□□ 0.75
CXCL3P19876 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CXCL3P19876 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.76■□□□□ 0.75
CXCL3P19876 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CXCL3P19876 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CXCL3P19876 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CXCL3P19876 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CXCL3P19876 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL3P19876 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CXCL3P19876 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL3P19876 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL3P19876 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL3P19876 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL3P19876 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL3P19876 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL3P19876 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.74■□□□□ 0.75
CXCL3P19876 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL3P19876 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL3P19876 SLC25A24-204ENST00000569674 2357 ntBASIC19.74■□□□□ 0.75
CXCL3P19876 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL3P19876 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.74■□□□□ 0.75
CXCL3P19876 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL3P19876 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.73■□□□□ 0.75
CXCL3P19876 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL3P19876 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.73■□□□□ 0.75
CXCL3P19876 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL3P19876 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL3P19876 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.73■□□□□ 0.75
CXCL3P19876 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL3P19876 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.72■□□□□ 0.75
CXCL3P19876 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL3P19876 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms