Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TNFRSF1AP19438 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20■□□□□ 0.79
TNFRSF1AP19438 AC103834.1-201ENST00000520383 144 ntBASIC20■□□□□ 0.79
TNFRSF1AP19438 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TNFRSF1AP19438 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20■□□□□ 0.79
TNFRSF1AP19438 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF1AP19438 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20■□□□□ 0.79
TNFRSF1AP19438 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF1AP19438 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF1AP19438 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF1AP19438 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF1AP19438 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TNFRSF1AP19438 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1AP19438 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFRSF1AP19438 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.98■□□□□ 0.79
TNFRSF1AP19438 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.98■□□□□ 0.79
TNFRSF1AP19438 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFRSF1AP19438 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFRSF1AP19438 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF1AP19438 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF1AP19438 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF1AP19438 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.97■□□□□ 0.79
TNFRSF1AP19438 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFRSF1AP19438 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.97■□□□□ 0.79
TNFRSF1AP19438 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFRSF1AP19438 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFRSF1AP19438 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
TNFRSF1AP19438 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TNFRSF1AP19438 AL031848.2-201ENST00000607670 837 ntBASIC19.96■□□□□ 0.79
TNFRSF1AP19438 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFRSF1AP19438 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
TNFRSF1AP19438 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFRSF1AP19438 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFRSF1AP19438 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.96■□□□□ 0.79
TNFRSF1AP19438 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFRSF1AP19438 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFRSF1AP19438 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TNFRSF1AP19438 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TNFRSF1AP19438 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFRSF1AP19438 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFRSF1AP19438 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TNFRSF1AP19438 KRT18P24-201ENST00000344739 1156 ntBASIC19.95■□□□□ 0.78
TNFRSF1AP19438 AC103724.3-201ENST00000564481 992 ntBASIC19.95■□□□□ 0.78
TNFRSF1AP19438 THA1P-201ENST00000590384 1145 ntBASIC19.95■□□□□ 0.78
TNFRSF1AP19438 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TNFRSF1AP19438 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.95■□□□□ 0.78
TNFRSF1AP19438 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFRSF1AP19438 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.94■□□□□ 0.78
TNFRSF1AP19438 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFRSF1AP19438 AC011551.1-201ENST00000614101 683 ntBASIC19.94■□□□□ 0.78
TNFRSF1AP19438 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TNFRSF1AP19438 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFRSF1AP19438 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFRSF1AP19438 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFRSF1AP19438 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFRSF1AP19438 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFRSF1AP19438 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFRSF1AP19438 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFRSF1AP19438 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TNFRSF1AP19438 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.93■□□□□ 0.78
TNFRSF1AP19438 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFRSF1AP19438 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFRSF1AP19438 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFRSF1AP19438 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TNFRSF1AP19438 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TNFRSF1AP19438 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFRSF1AP19438 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFRSF1AP19438 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFRSF1AP19438 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFRSF1AP19438 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.92■□□□□ 0.78
TNFRSF1AP19438 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.92■□□□□ 0.78
TNFRSF1AP19438 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFRSF1AP19438 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TNFRSF1AP19438 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.91■□□□□ 0.78
TNFRSF1AP19438 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFRSF1AP19438 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFRSF1AP19438 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.91■□□□□ 0.78
TNFRSF1AP19438 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.91■□□□□ 0.78
TNFRSF1AP19438 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFRSF1AP19438 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TNFRSF1AP19438 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFRSF1AP19438 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.9■□□□□ 0.78
TNFRSF1AP19438 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFRSF1AP19438 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1AP19438 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1AP19438 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1AP19438 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1AP19438 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TNFRSF1AP19438 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
TNFRSF1AP19438 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1AP19438 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1AP19438 AC120024.1-201ENST00000562672 995 ntBASIC19.89■□□□□ 0.77
TNFRSF1AP19438 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TNFRSF1AP19438 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF1AP19438 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
TNFRSF1AP19438 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF1AP19438 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.88■□□□□ 0.77
TNFRSF1AP19438 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TNFRSF1AP19438 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF1AP19438 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms