Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.08■□□□□ 0.65
Ccl3P10855 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
Ccl3P10855 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccl3P10855 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ccl3P10855 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ccl3P10855 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccl3P10855 Serp2-204ENSMUST00000228055 705 ntBASIC19.07■□□□□ 0.64
Ccl3P10855 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccl3P10855 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccl3P10855 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccl3P10855 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccl3P10855 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccl3P10855 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccl3P10855 Gm45417-201ENSMUST00000209533 758 ntBASIC19.06■□□□□ 0.64
Ccl3P10855 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccl3P10855 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ccl3P10855 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.06■□□□□ 0.64
Ccl3P10855 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccl3P10855 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccl3P10855 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccl3P10855 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccl3P10855 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccl3P10855 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccl3P10855 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.04■□□□□ 0.64
Ccl3P10855 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccl3P10855 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
Ccl3P10855 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
Ccl3P10855 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccl3P10855 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ccl3P10855 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccl3P10855 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.03■□□□□ 0.64
Ccl3P10855 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccl3P10855 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccl3P10855 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccl3P10855 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccl3P10855 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.03■□□□□ 0.64
Ccl3P10855 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.03■□□□□ 0.64
Ccl3P10855 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccl3P10855 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ccl3P10855 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ccl3P10855 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccl3P10855 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.02■□□□□ 0.64
Ccl3P10855 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccl3P10855 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccl3P10855 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccl3P10855 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccl3P10855 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Ccl3P10855 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccl3P10855 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccl3P10855 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccl3P10855 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccl3P10855 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccl3P10855 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccl3P10855 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccl3P10855 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccl3P10855 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccl3P10855 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccl3P10855 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccl3P10855 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccl3P10855 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccl3P10855 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.99■□□□□ 0.63
Ccl3P10855 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.99■□□□□ 0.63
Ccl3P10855 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccl3P10855 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccl3P10855 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccl3P10855 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccl3P10855 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccl3P10855 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccl3P10855 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccl3P10855 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccl3P10855 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccl3P10855 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccl3P10855 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
Ccl3P10855 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccl3P10855 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccl3P10855 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Ccl3P10855 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccl3P10855 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ccl3P10855 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccl3P10855 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccl3P10855 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccl3P10855 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ccl3P10855 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccl3P10855 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccl3P10855 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccl3P10855 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccl3P10855 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccl3P10855 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccl3P10855 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccl3P10855 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl3P10855 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl3P10855 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl3P10855 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl3P10855 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl3P10855 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.95■□□□□ 0.62
Ccl3P10855 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl3P10855 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl3P10855 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccl3P10855 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccl3P10855 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms