Protein–RNA interactions for Protein: P0CX57

TY1A-A, Transposon Ty1-A Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-AP0CX57 tD(GUC)L1tD(GUC)L1 72 nt7.69□□□□□ -1.18
TY1A-AP0CX57 tD(GUC)L2tD(GUC)L2 72 nt7.69□□□□□ -1.18
TY1A-AP0CX57 tD(GUC)MtD(GUC)M 72 nt7.69□□□□□ -1.18
TY1A-AP0CX57 tD(GUC)OtD(GUC)O 72 nt7.69□□□□□ -1.18
TY1A-AP0CX57 THI74YDR438W 1113 nt7.69□□□□□ -1.18
TY1A-AP0CX57 FMO1YHR176W 1299 nt7.69□□□□□ -1.18
TY1A-AP0CX57 SYS1YJL004C 612 nt7.69□□□□□ -1.18
TY1A-AP0CX57 YKR070WYKR070W 1059 nt7.69□□□□□ -1.18
TY1A-AP0CX57 YAR028WYAR028W 705 nt7.69□□□□□ -1.18
TY1A-AP0CX57 YOL013W-BYOL013W-B 291 nt7.69□□□□□ -1.18
TY1A-AP0CX57 HXT7YDR342C 1713 nt7.69□□□□□ -1.18
TY1A-AP0CX57 HXT6YDR343C 1713 nt7.69□□□□□ -1.18
TY1A-AP0CX57 PPH3YDR075W 927 nt7.68□□□□□ -1.18
TY1A-AP0CX57 YDR290WYDR290W 330 nt7.68□□□□□ -1.18
TY1A-AP0CX57 RPP1YHR062C 882 nt7.68□□□□□ -1.18
TY1A-AP0CX57 YLR030WYLR030W 792 nt7.68□□□□□ -1.18
TY1A-AP0CX57 MRPL4YLR439W 960 nt7.68□□□□□ -1.18
TY1A-AP0CX57 YNL017CYNL017C 339 nt7.68□□□□□ -1.18
TY1A-AP0CX57 YNL046WYNL046W 519 nt7.68□□□□□ -1.18
TY1A-AP0CX57 YNL146WYNL146W 303 nt7.68□□□□□ -1.18
TY1A-AP0CX57 CDC21YOR074C 915 nt7.68□□□□□ -1.18
TY1A-AP0CX57 HSH49YOR319W 642 nt7.68□□□□□ -1.18
TY1A-AP0CX57 YBR226CYBR226C 411 nt7.68□□□□□ -1.18
TY1A-AP0CX57 PTC6YCR079W 1329 nt7.68□□□□□ -1.18
TY1A-AP0CX57 VPS36YLR417W 1701 nt7.67□□□□□ -1.18
TY1A-AP0CX57 RRT14YIL127C 621 nt7.67□□□□□ -1.18
TY1A-AP0CX57 SNX4YJL036W 1272 nt7.67□□□□□ -1.18
TY1A-AP0CX57 NIT3YLR351C 876 nt7.67□□□□□ -1.18
TY1A-AP0CX57 RIM11YMR139W 1113 nt7.67□□□□□ -1.18
TY1A-AP0CX57 YNL058CYNL058C 951 nt7.67□□□□□ -1.18
TY1A-AP0CX57 SPC29YPL124W 762 nt7.67□□□□□ -1.18
TY1A-AP0CX57 YMC2YBR104W 990 nt7.67□□□□□ -1.18
TY1A-AP0CX57 LDB16YCL005W 771 nt7.67□□□□□ -1.18
TY1A-AP0CX57 ECM27YJR106W 2178 nt7.67□□□□□ -1.18
TY1A-AP0CX57 RAD7YJR052W 1698 nt7.67□□□□□ -1.18
TY1A-AP0CX57 DPL1YDR294C 1770 nt7.66□□□□□ -1.18
TY1A-AP0CX57 PRD1YCL057W 2139 nt7.66□□□□□ -1.18
TY1A-AP0CX57 SNM1YDR478W 597 nt7.66□□□□□ -1.18
TY1A-AP0CX57 IGD1YFR017C 588 nt7.66□□□□□ -1.18
TY1A-AP0CX57 tL(GAG)GtL(GAG)G 82 nt7.66□□□□□ -1.18
TY1A-AP0CX57 YHL019W-AYHL019W-A 594 nt7.66□□□□□ -1.18
TY1A-AP0CX57 IRC19YLL033W 693 nt7.66□□□□□ -1.18
TY1A-AP0CX57 RRN10YBL025W 438 nt7.66□□□□□ -1.18
TY1A-AP0CX57 PGA2YNL149C 390 nt7.66□□□□□ -1.18
TY1A-AP0CX57 ARG1YOL058W 1263 nt7.66□□□□□ -1.18
TY1A-AP0CX57 YBR144CYBR144C 315 nt7.66□□□□□ -1.18
TY1A-AP0CX57 YBR287WYBR287W 1284 nt7.66□□□□□ -1.18
TY1A-AP0CX57 CLG1YGL215W 1359 nt7.66□□□□□ -1.18
TY1A-AP0CX57 SER3YER081W 1410 nt7.66□□□□□ -1.18
TY1A-AP0CX57 RSC58YLR033W 1509 nt7.66□□□□□ -1.18
TY1A-AP0CX57 APJ1YNL077W 1587 nt7.66□□□□□ -1.18
TY1A-AP0CX57 YIL089WYIL089W 618 nt7.65□□□□□ -1.18
TY1A-AP0CX57 HBS1YKR084C 1836 nt7.65□□□□□ -1.18
TY1A-AP0CX57 DUS3YLR401C 2007 nt7.65□□□□□ -1.18
TY1A-AP0CX57 OGG1YML060W 1131 nt7.65□□□□□ -1.18
TY1A-AP0CX57 RPD3YNL330C 1302 nt7.65□□□□□ -1.18
TY1A-AP0CX57 MIM1YOL026C 342 nt7.65□□□□□ -1.18
TY1A-AP0CX57 SKS1YPL026C 1509 nt7.65□□□□□ -1.18
TY1A-AP0CX57 PEP4YPL154C 1218 nt7.65□□□□□ -1.18
TY1A-AP0CX57 DIM1YPL266W 957 nt7.65□□□□□ -1.18
TY1A-AP0CX57 YCL007CYCL007C 393 nt7.65□□□□□ -1.18
TY1A-AP0CX57 BUD22YMR014W 1560 nt7.64□□□□□ -1.19
TY1A-AP0CX57 ERT1YBR239C 1590 nt7.64□□□□□ -1.19
TY1A-AP0CX57 RPT5YOR117W 1305 nt7.64□□□□□ -1.19
TY1A-AP0CX57 YDR018CYDR018C 1191 nt7.64□□□□□ -1.19
TY1A-AP0CX57 MIX14YDR031W 366 nt7.64□□□□□ -1.19
TY1A-AP0CX57 GLE2YER107C 1098 nt7.64□□□□□ -1.19
TY1A-AP0CX57 YGL082WYGL082W 1146 nt7.64□□□□□ -1.19
TY1A-AP0CX57 PDE1YGL248W 1110 nt7.64□□□□□ -1.19
TY1A-AP0CX57 YHR069C-AYHR069C-A 363 nt7.64□□□□□ -1.19
TY1A-AP0CX57 TIM44YIL022W 1296 nt7.64□□□□□ -1.19
TY1A-AP0CX57 MID2YLR332W 1131 nt7.64□□□□□ -1.19
TY1A-AP0CX57 RIF2YLR453C 1188 nt7.64□□□□□ -1.19
TY1A-AP0CX57 POP8YBL018C 402 nt7.64□□□□□ -1.19
TY1A-AP0CX57 YMR103CYMR103C 363 nt7.64□□□□□ -1.19
TY1A-AP0CX57 YOR300WYOR300W 309 nt7.64□□□□□ -1.19
TY1A-AP0CX57 RIB7YBR153W 735 nt7.64□□□□□ -1.19
TY1A-AP0CX57 LPD1YFL018C 1500 nt7.63□□□□□ -1.19
TY1A-AP0CX57 DEF1YKL054C 2217 nt7.63□□□□□ -1.19
TY1A-AP0CX57 PST1YDR055W 1335 nt7.63□□□□□ -1.19
TY1A-AP0CX57 YCR085WYCR085W 354 nt7.63□□□□□ -1.19
TY1A-AP0CX57 YDR010CYDR010C 333 nt7.63□□□□□ -1.19
TY1A-AP0CX57 MOB2YFL034C-B 864 nt7.63□□□□□ -1.19
TY1A-AP0CX57 SRB5YGR104C 924 nt7.63□□□□□ -1.19
TY1A-AP0CX57 MED6YHR058C 888 nt7.63□□□□□ -1.19
TY1A-AP0CX57 PEX2YJL210W 816 nt7.63□□□□□ -1.19
TY1A-AP0CX57 THI11YJR156C 1023 nt7.63□□□□□ -1.19
TY1A-AP0CX57 PRS1YKL181W 1284 nt7.63□□□□□ -1.19
TY1A-AP0CX57 YBL029WYBL029W 1131 nt7.63□□□□□ -1.19
TY1A-AP0CX57 YPL205CYPL205C 345 nt7.63□□□□□ -1.19
TY1A-AP0CX57 YPR172WYPR172W 603 nt7.63□□□□□ -1.19
TY1A-AP0CX57 REF2YDR195W 1602 nt7.63□□□□□ -1.19
TY1A-AP0CX57 SIP5YMR140W 1470 nt7.62□□□□□ -1.19
TY1A-AP0CX57 UTH1YKR042W 1098 nt7.62□□□□□ -1.19
TY1A-AP0CX57 SIC1YLR079W 855 nt7.62□□□□□ -1.19
TY1A-AP0CX57 COQ9YLR201C 783 nt7.62□□□□□ -1.19
TY1A-AP0CX57 CCS1YMR038C 750 nt7.62□□□□□ -1.19
TY1A-AP0CX57 YPR078CYPR078C 1119 nt7.62□□□□□ -1.19
TY1A-AP0CX57 GRX1YCL035C 333 nt7.62□□□□□ -1.19
TY1A-AP0CX57 ATF1YOR377W 1578 nt7.62□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 86.4 ms