Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sod1P08228 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sod1P08228 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sod1P08228 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sod1P08228 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sod1P08228 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sod1P08228 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.42■□□□□ 0.86
Sod1P08228 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sod1P08228 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sod1P08228 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sod1P08228 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.41■□□□□ 0.86
Sod1P08228 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.41■□□□□ 0.86
Sod1P08228 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sod1P08228 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sod1P08228 Golgb1-201ENSMUST00000023534 498 ntBASIC20.41■□□□□ 0.86
Sod1P08228 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sod1P08228 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sod1P08228 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sod1P08228 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sod1P08228 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sod1P08228 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.4■□□□□ 0.86
Sod1P08228 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.4■□□□□ 0.86
Sod1P08228 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sod1P08228 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sod1P08228 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sod1P08228 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
Sod1P08228 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sod1P08228 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sod1P08228 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Sod1P08228 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sod1P08228 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sod1P08228 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.39■□□□□ 0.85
Sod1P08228 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.39■□□□□ 0.85
Sod1P08228 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.39■□□□□ 0.85
Sod1P08228 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sod1P08228 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Sod1P08228 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sod1P08228 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sod1P08228 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Sod1P08228 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sod1P08228 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sod1P08228 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.37■□□□□ 0.85
Sod1P08228 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sod1P08228 Gm12821-201ENSMUST00000120022 600 ntBASIC20.36■□□□□ 0.85
Sod1P08228 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sod1P08228 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sod1P08228 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Sod1P08228 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sod1P08228 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sod1P08228 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sod1P08228 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sod1P08228 Gm27454-201ENSMUST00000185090 204 ntBASIC20.35■□□□□ 0.85
Sod1P08228 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sod1P08228 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sod1P08228 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sod1P08228 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.34■□□□□ 0.85
Sod1P08228 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Sod1P08228 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sod1P08228 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sod1P08228 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.34■□□□□ 0.85
Sod1P08228 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sod1P08228 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.33■□□□□ 0.85
Sod1P08228 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sod1P08228 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sod1P08228 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Sod1P08228 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sod1P08228 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Sod1P08228 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sod1P08228 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sod1P08228 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sod1P08228 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Sod1P08228 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sod1P08228 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sod1P08228 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sod1P08228 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sod1P08228 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sod1P08228 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sod1P08228 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sod1P08228 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sod1P08228 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sod1P08228 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.3■□□□□ 0.84
Sod1P08228 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Sod1P08228 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sod1P08228 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Sod1P08228 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Sod1P08228 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Sod1P08228 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sod1P08228 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sod1P08228 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
Sod1P08228 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.29■□□□□ 0.84
Sod1P08228 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.29■□□□□ 0.84
Sod1P08228 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sod1P08228 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sod1P08228 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sod1P08228 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.28■□□□□ 0.84
Sod1P08228 Gm45417-201ENSMUST00000209533 758 ntBASIC20.28■□□□□ 0.84
Sod1P08228 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sod1P08228 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.27■□□□□ 0.84
Sod1P08228 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sod1P08228 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms