Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cd74P04441 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd74P04441 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd74P04441 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.74■□□□□ 0.43
Cd74P04441 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cd74P04441 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Cd74P04441 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.74■□□□□ 0.43
Cd74P04441 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd74P04441 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cd74P04441 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd74P04441 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd74P04441 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd74P04441 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd74P04441 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cd74P04441 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd74P04441 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cd74P04441 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd74P04441 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.72■□□□□ 0.43
Cd74P04441 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd74P04441 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.72■□□□□ 0.43
Cd74P04441 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cd74P04441 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cd74P04441 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd74P04441 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.71■□□□□ 0.43
Cd74P04441 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd74P04441 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd74P04441 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd74P04441 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd74P04441 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cd74P04441 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd74P04441 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd74P04441 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cd74P04441 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.7■□□□□ 0.42
Cd74P04441 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd74P04441 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd74P04441 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cd74P04441 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.7■□□□□ 0.42
Cd74P04441 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd74P04441 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd74P04441 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd74P04441 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd74P04441 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd74P04441 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd74P04441 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd74P04441 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Cd74P04441 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd74P04441 Gm43566-201ENSMUST00000196851 808 ntBASIC17.69■□□□□ 0.42
Cd74P04441 Gm45444-201ENSMUST00000211394 898 ntBASIC17.69■□□□□ 0.42
Cd74P04441 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd74P04441 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd74P04441 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd74P04441 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd74P04441 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.69■□□□□ 0.42
Cd74P04441 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.69■□□□□ 0.42
Cd74P04441 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd74P04441 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd74P04441 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd74P04441 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.69■□□□□ 0.42
Cd74P04441 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cd74P04441 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd74P04441 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cd74P04441 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Cd74P04441 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd74P04441 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Cd74P04441 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cd74P04441 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd74P04441 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd74P04441 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd74P04441 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cd74P04441 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd74P04441 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.67■□□□□ 0.42
Cd74P04441 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cd74P04441 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cd74P04441 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Cd74P04441 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.66■□□□□ 0.42
Cd74P04441 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cd74P04441 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd74P04441 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd74P04441 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cd74P04441 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cd74P04441 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.65■□□□□ 0.42
Cd74P04441 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cd74P04441 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.65■□□□□ 0.42
Cd74P04441 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.65■□□□□ 0.42
Cd74P04441 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.65■□□□□ 0.42
Cd74P04441 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.65■□□□□ 0.42
Cd74P04441 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cd74P04441 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.65■□□□□ 0.42
Cd74P04441 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd74P04441 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd74P04441 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cd74P04441 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cd74P04441 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.64■□□□□ 0.41
Cd74P04441 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd74P04441 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd74P04441 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cd74P04441 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cd74P04441 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cd74P04441 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd74P04441 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms