Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AL356740.2-201ENST00000601559 647 ntBASIC26.37■■□□□ 1.81
CD4P01730 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CD4P01730 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CD4P01730 AC096631.2-201ENST00000436136 790 ntBASIC26.36■■□□□ 1.81
CD4P01730 AC011551.1-201ENST00000614101 683 ntBASIC26.36■■□□□ 1.81
CD4P01730 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
CD4P01730 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.36■■□□□ 1.81
CD4P01730 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CD4P01730 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.35■■□□□ 1.81
CD4P01730 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.35■■□□□ 1.81
CD4P01730 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CD4P01730 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.35■■□□□ 1.81
CD4P01730 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.35■■□□□ 1.81
CD4P01730 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CD4P01730 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.34■■□□□ 1.81
CD4P01730 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.34■■□□□ 1.81
CD4P01730 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.34■■□□□ 1.81
CD4P01730 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.33■■□□□ 1.81
CD4P01730 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.33■■□□□ 1.81
CD4P01730 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.33■■□□□ 1.81
CD4P01730 AC133561.4-201ENST00000566112 224 ntBASIC26.33■■□□□ 1.81
CD4P01730 AL512631.2-201ENST00000604634 923 ntBASIC26.33■■□□□ 1.81
CD4P01730 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CD4P01730 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
CD4P01730 AP004609.3-201ENST00000610705 1884 ntBASIC26.32■■□□□ 1.8
CD4P01730 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.32■■□□□ 1.8
CD4P01730 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CD4P01730 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CD4P01730 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CD4P01730 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CD4P01730 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CD4P01730 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.31■■□□□ 1.8
CD4P01730 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CD4P01730 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CD4P01730 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CD4P01730 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CD4P01730 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.3■■□□□ 1.8
CD4P01730 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.3■■□□□ 1.8
CD4P01730 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CD4P01730 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CD4P01730 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CD4P01730 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.29■■□□□ 1.8
CD4P01730 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CD4P01730 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CD4P01730 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CD4P01730 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CD4P01730 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CD4P01730 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CD4P01730 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CD4P01730 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CD4P01730 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CD4P01730 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.27■■□□□ 1.8
CD4P01730 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.26■■□□□ 1.79
CD4P01730 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CD4P01730 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CD4P01730 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CD4P01730 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.25■■□□□ 1.79
CD4P01730 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.25■■□□□ 1.79
CD4P01730 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.25■■□□□ 1.79
CD4P01730 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.25■■□□□ 1.79
CD4P01730 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.25■■□□□ 1.79
CD4P01730 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CD4P01730 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CD4P01730 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
CD4P01730 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CD4P01730 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
CD4P01730 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.23■■□□□ 1.79
CD4P01730 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.23■■□□□ 1.79
CD4P01730 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CD4P01730 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.23■■□□□ 1.79
CD4P01730 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
CD4P01730 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CD4P01730 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
CD4P01730 AF131216.4-201ENST00000638924 1588 ntBASIC26.22■■□□□ 1.79
CD4P01730 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CD4P01730 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CD4P01730 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.22■■□□□ 1.79
CD4P01730 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CD4P01730 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.22■■□□□ 1.79
CD4P01730 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CD4P01730 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.21■■□□□ 1.79
CD4P01730 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CD4P01730 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.21■■□□□ 1.79
CD4P01730 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.21■■□□□ 1.79
CD4P01730 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.2■■□□□ 1.78
CD4P01730 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CD4P01730 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
CD4P01730 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CD4P01730 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CD4P01730 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.19■■□□□ 1.78
CD4P01730 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.19■■□□□ 1.78
CD4P01730 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.19■■□□□ 1.78
CD4P01730 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CD4P01730 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CD4P01730 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CD4P01730 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
CD4P01730 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.18■■□□□ 1.78
CD4P01730 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.18■■□□□ 1.78
CD4P01730 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CD4P01730 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms