Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01643 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01643 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.97■□□□□ 0.31
P01643 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01643 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01643 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01643 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01643 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01643 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01643 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P01643 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.97■□□□□ 0.31
P01643 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.96■□□□□ 0.31
P01643 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
P01643 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01643 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01643 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01643 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01643 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
P01643 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
P01643 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
P01643 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
P01643 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01643 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.95■□□□□ 0.3
P01643 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01643 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
P01643 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01643 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01643 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01643 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P01643 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01643 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01643 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
P01643 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01643 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01643 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01643 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
P01643 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01643 Gm22238-201ENSMUST00000175222 88 ntBASIC16.94■□□□□ 0.3
P01643 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.94■□□□□ 0.3
P01643 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01643 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01643 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01643 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01643 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01643 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01643 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.93■□□□□ 0.3
P01643 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.93■□□□□ 0.3
P01643 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.93■□□□□ 0.3
P01643 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01643 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01643 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01643 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01643 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01643 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01643 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01643 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01643 Gm15039-201ENSMUST00000118914 875 ntBASIC16.92■□□□□ 0.3
P01643 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
P01643 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.92■□□□□ 0.3
P01643 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
P01643 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01643 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01643 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01643 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01643 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01643 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01643 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01643 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01643 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01643 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.9■□□□□ 0.3
P01643 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01643 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01643 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
P01643 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.9■□□□□ 0.3
P01643 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
P01643 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
P01643 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01643 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.89■□□□□ 0.29
P01643 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01643 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.89■□□□□ 0.29
P01643 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.89■□□□□ 0.29
P01643 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
P01643 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P01643 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P01643 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.88■□□□□ 0.29
P01643 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01643 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P01643 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01643 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
P01643 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01643 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P01643 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01643 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01643 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01643 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
P01643 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.87■□□□□ 0.29
P01643 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01643 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01643 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P01643 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms