Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NgfP01139 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
NgfP01139 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NgfP01139 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
NgfP01139 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
NgfP01139 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NgfP01139 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NgfP01139 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.06■□□□□ 0.64
NgfP01139 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
NgfP01139 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NgfP01139 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NgfP01139 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NgfP01139 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NgfP01139 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NgfP01139 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NgfP01139 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NgfP01139 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NgfP01139 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NgfP01139 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NgfP01139 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NgfP01139 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.04■□□□□ 0.64
NgfP01139 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.04■□□□□ 0.64
NgfP01139 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.04■□□□□ 0.64
NgfP01139 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NgfP01139 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
NgfP01139 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
NgfP01139 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NgfP01139 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.04■□□□□ 0.64
NgfP01139 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NgfP01139 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NgfP01139 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NgfP01139 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.03■□□□□ 0.64
NgfP01139 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.03■□□□□ 0.64
NgfP01139 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.03■□□□□ 0.64
NgfP01139 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NgfP01139 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NgfP01139 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NgfP01139 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NgfP01139 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NgfP01139 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NgfP01139 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.02■□□□□ 0.64
NgfP01139 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.02■□□□□ 0.64
NgfP01139 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NgfP01139 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NgfP01139 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NgfP01139 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NgfP01139 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NgfP01139 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NgfP01139 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NgfP01139 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NgfP01139 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.01■□□□□ 0.63
NgfP01139 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.01■□□□□ 0.63
NgfP01139 Golgb1-201ENSMUST00000023534 498 ntBASIC19.01■□□□□ 0.63
NgfP01139 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NgfP01139 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
NgfP01139 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NgfP01139 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NgfP01139 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NgfP01139 Gm12821-201ENSMUST00000120022 600 ntBASIC18.99■□□□□ 0.63
NgfP01139 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.99■□□□□ 0.63
NgfP01139 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.99■□□□□ 0.63
NgfP01139 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NgfP01139 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NgfP01139 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NgfP01139 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.98■□□□□ 0.63
NgfP01139 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NgfP01139 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NgfP01139 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NgfP01139 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.98■□□□□ 0.63
NgfP01139 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.98■□□□□ 0.63
NgfP01139 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NgfP01139 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NgfP01139 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NgfP01139 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NgfP01139 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NgfP01139 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NgfP01139 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NgfP01139 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NgfP01139 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.96■□□□□ 0.63
NgfP01139 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NgfP01139 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NgfP01139 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NgfP01139 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NgfP01139 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NgfP01139 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NgfP01139 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NgfP01139 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NgfP01139 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NgfP01139 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NgfP01139 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.95■□□□□ 0.62
NgfP01139 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NgfP01139 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.94■□□□□ 0.62
NgfP01139 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NgfP01139 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NgfP01139 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
NgfP01139 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NgfP01139 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NgfP01139 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NgfP01139 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
NgfP01139 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms