Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT4O95628 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT4O95628 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT4O95628 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT4O95628 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT4O95628 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT4O95628 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CNOT4O95628 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT4O95628 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT4O95628 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.88■□□□□ 0.93
CNOT4O95628 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.88■□□□□ 0.93
CNOT4O95628 AC103724.3-201ENST00000564481 992 ntBASIC20.88■□□□□ 0.93
CNOT4O95628 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CNOT4O95628 AC145676.1-201ENST00000514988 2004 ntBASIC20.88■□□□□ 0.93
CNOT4O95628 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT4O95628 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT4O95628 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNOT4O95628 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT4O95628 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CNOT4O95628 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT4O95628 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT4O95628 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT4O95628 KRT18P24-201ENST00000344739 1156 ntBASIC20.87■□□□□ 0.93
CNOT4O95628 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CNOT4O95628 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT4O95628 AC131212.1-201ENST00000613771 668 ntBASIC20.87■□□□□ 0.93
CNOT4O95628 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CNOT4O95628 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNOT4O95628 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CNOT4O95628 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.86■□□□□ 0.93
CNOT4O95628 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT4O95628 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT4O95628 AC019069.1-201ENST00000610008 1333 ntBASIC20.86■□□□□ 0.93
CNOT4O95628 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT4O95628 AL031848.2-201ENST00000607670 837 ntBASIC20.86■□□□□ 0.93
CNOT4O95628 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNOT4O95628 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.86■□□□□ 0.93
CNOT4O95628 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
CNOT4O95628 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.85■□□□□ 0.93
CNOT4O95628 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT4O95628 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT4O95628 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT4O95628 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.85■□□□□ 0.93
CNOT4O95628 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.85■□□□□ 0.93
CNOT4O95628 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
CNOT4O95628 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT4O95628 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT4O95628 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNOT4O95628 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CNOT4O95628 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.84■□□□□ 0.93
CNOT4O95628 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.84■□□□□ 0.93
CNOT4O95628 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.84■□□□□ 0.93
CNOT4O95628 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.84■□□□□ 0.93
CNOT4O95628 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.84■□□□□ 0.93
CNOT4O95628 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.84■□□□□ 0.93
CNOT4O95628 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.84■□□□□ 0.93
CNOT4O95628 AC091060.1-201ENST00000623524 1766 ntBASIC20.84■□□□□ 0.93
CNOT4O95628 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT4O95628 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNOT4O95628 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT4O95628 FOXO3B-201ENST00000395675 1928 ntBASIC20.83■□□□□ 0.93
CNOT4O95628 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT4O95628 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNOT4O95628 AC011551.1-201ENST00000614101 683 ntBASIC20.83■□□□□ 0.93
CNOT4O95628 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNOT4O95628 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CNOT4O95628 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNOT4O95628 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT4O95628 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT4O95628 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT4O95628 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.82■□□□□ 0.92
CNOT4O95628 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT4O95628 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT4O95628 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
CNOT4O95628 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.82■□□□□ 0.92
CNOT4O95628 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT4O95628 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT4O95628 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT4O95628 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT4O95628 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
CNOT4O95628 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT4O95628 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT4O95628 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CNOT4O95628 THA1P-201ENST00000590384 1145 ntBASIC20.8■□□□□ 0.92
CNOT4O95628 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT4O95628 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CNOT4O95628 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT4O95628 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT4O95628 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.79■□□□□ 0.92
CNOT4O95628 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.79■□□□□ 0.92
CNOT4O95628 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT4O95628 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.79■□□□□ 0.92
CNOT4O95628 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.79■□□□□ 0.92
CNOT4O95628 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.79■□□□□ 0.92
CNOT4O95628 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CNOT4O95628 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.78■□□□□ 0.92
CNOT4O95628 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CNOT4O95628 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CNOT4O95628 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CNOT4O95628 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms