Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF13O75888 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF13O75888 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF13O75888 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF13O75888 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.9■□□□□ 0.94
TNFSF13O75888 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF13O75888 AC021242.3-201ENST00000607598 1377 ntBASIC20.9■□□□□ 0.94
TNFSF13O75888 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.9■□□□□ 0.94
TNFSF13O75888 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF13O75888 AC131212.1-201ENST00000613771 668 ntBASIC20.9■□□□□ 0.94
TNFSF13O75888 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
TNFSF13O75888 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TNFSF13O75888 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF13O75888 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF13O75888 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF13O75888 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFSF13O75888 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.89■□□□□ 0.93
TNFSF13O75888 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFSF13O75888 AC097639.1-201ENST00000565519 1891 ntBASIC20.89■□□□□ 0.93
TNFSF13O75888 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF13O75888 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF13O75888 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TNFSF13O75888 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.88■□□□□ 0.93
TNFSF13O75888 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.88■□□□□ 0.93
TNFSF13O75888 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.88■□□□□ 0.93
TNFSF13O75888 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF13O75888 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TNFSF13O75888 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.88■□□□□ 0.93
TNFSF13O75888 AC092803.2-201ENST00000564287 1899 ntBASIC20.88■□□□□ 0.93
TNFSF13O75888 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF13O75888 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF13O75888 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.87■□□□□ 0.93
TNFSF13O75888 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TNFSF13O75888 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.87■□□□□ 0.93
TNFSF13O75888 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF13O75888 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF13O75888 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF13O75888 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
TNFSF13O75888 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF13O75888 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF13O75888 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF13O75888 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TNFSF13O75888 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF13O75888 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.86■□□□□ 0.93
TNFSF13O75888 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF13O75888 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF13O75888 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.85■□□□□ 0.93
TNFSF13O75888 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF13O75888 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF13O75888 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF13O75888 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF13O75888 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TNFSF13O75888 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.85■□□□□ 0.93
TNFSF13O75888 UNC93B8-201ENST00000511903 705 ntBASIC20.85■□□□□ 0.93
TNFSF13O75888 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF13O75888 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF13O75888 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF13O75888 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.84■□□□□ 0.93
TNFSF13O75888 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.84■□□□□ 0.93
TNFSF13O75888 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.84■□□□□ 0.93
TNFSF13O75888 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF13O75888 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF13O75888 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF13O75888 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.83■□□□□ 0.93
TNFSF13O75888 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.83■□□□□ 0.93
TNFSF13O75888 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.83■□□□□ 0.93
TNFSF13O75888 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.83■□□□□ 0.93
TNFSF13O75888 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.83■□□□□ 0.93
TNFSF13O75888 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TNFSF13O75888 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.83■□□□□ 0.93
TNFSF13O75888 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TNFSF13O75888 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TNFSF13O75888 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF13O75888 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF13O75888 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.82■□□□□ 0.92
TNFSF13O75888 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
TNFSF13O75888 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.82■□□□□ 0.92
TNFSF13O75888 AC092028.1-203ENST00000608262 953 ntBASIC20.82■□□□□ 0.92
TNFSF13O75888 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.82■□□□□ 0.92
TNFSF13O75888 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
TNFSF13O75888 AC135731.1-201ENST00000569415 2548 ntBASIC20.82■□□□□ 0.92
TNFSF13O75888 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF13O75888 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF13O75888 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TNFSF13O75888 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF13O75888 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF13O75888 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF13O75888 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF13O75888 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF13O75888 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF13O75888 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFSF13O75888 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.81■□□□□ 0.92
TNFSF13O75888 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF13O75888 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.81■□□□□ 0.92
TNFSF13O75888 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF13O75888 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF13O75888 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.8■□□□□ 0.92
TNFSF13O75888 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.8■□□□□ 0.92
TNFSF13O75888 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF13O75888 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms