Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.3■■□□□ 1
PTP4A3O75365 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.3■■□□□ 1
PTP4A3O75365 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTP4A3O75365 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTP4A3O75365 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTP4A3O75365 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PTP4A3O75365 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PTP4A3O75365 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTP4A3O75365 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTP4A3O75365 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.29■■□□□ 1
PTP4A3O75365 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.29■■□□□ 1
PTP4A3O75365 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTP4A3O75365 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PTP4A3O75365 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTP4A3O75365 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTP4A3O75365 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.29■■□□□ 1
PTP4A3O75365 RAP2CP1-202ENST00000605179 643 ntBASIC21.29■■□□□ 1
PTP4A3O75365 MIR6089-201ENST00000616698 64 ntBASIC21.29■■□□□ 1
PTP4A3O75365 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.29■■□□□ 1
PTP4A3O75365 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTP4A3O75365 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.29■■□□□ 1
PTP4A3O75365 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.29■■□□□ 1
PTP4A3O75365 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.29■■□□□ 1
PTP4A3O75365 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTP4A3O75365 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTP4A3O75365 MIR4449-201ENST00000578365 66 ntBASIC21.28■■□□□ 1
PTP4A3O75365 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTP4A3O75365 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.28■■□□□ 1
PTP4A3O75365 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.28■■□□□ 1
PTP4A3O75365 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTP4A3O75365 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTP4A3O75365 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTP4A3O75365 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
PTP4A3O75365 AC141586.4-201ENST00000624558 1573 ntBASIC21.27■■□□□ 1
PTP4A3O75365 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTP4A3O75365 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PTP4A3O75365 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.27■■□□□ 1
PTP4A3O75365 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PTP4A3O75365 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.27■■□□□ 1
PTP4A3O75365 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTP4A3O75365 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTP4A3O75365 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PTP4A3O75365 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
PTP4A3O75365 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTP4A3O75365 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PTP4A3O75365 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.26■□□□□ 0.99
PTP4A3O75365 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.25■□□□□ 0.99
PTP4A3O75365 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTP4A3O75365 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTP4A3O75365 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTP4A3O75365 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTP4A3O75365 AC026202.3-201ENST00000600805 1127 ntBASIC21.25■□□□□ 0.99
PTP4A3O75365 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTP4A3O75365 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTP4A3O75365 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PTP4A3O75365 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTP4A3O75365 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTP4A3O75365 GPX1-201ENST00000419349 1106 ntBASIC21.24■□□□□ 0.99
PTP4A3O75365 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.24■□□□□ 0.99
PTP4A3O75365 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTP4A3O75365 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.24■□□□□ 0.99
PTP4A3O75365 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTP4A3O75365 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
PTP4A3O75365 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTP4A3O75365 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTP4A3O75365 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PTP4A3O75365 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.22■□□□□ 0.99
PTP4A3O75365 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTP4A3O75365 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTP4A3O75365 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTP4A3O75365 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.22■□□□□ 0.99
PTP4A3O75365 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTP4A3O75365 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTP4A3O75365 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PTP4A3O75365 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTP4A3O75365 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTP4A3O75365 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.21■□□□□ 0.99
PTP4A3O75365 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.21■□□□□ 0.99
PTP4A3O75365 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PTP4A3O75365 KRT18P10-201ENST00000388836 1287 ntBASIC21.21■□□□□ 0.99
PTP4A3O75365 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTP4A3O75365 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTP4A3O75365 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.21■□□□□ 0.99
PTP4A3O75365 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.21■□□□□ 0.99
PTP4A3O75365 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTP4A3O75365 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTP4A3O75365 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTP4A3O75365 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTP4A3O75365 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTP4A3O75365 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.2■□□□□ 0.99
PTP4A3O75365 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTP4A3O75365 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.2■□□□□ 0.98
PTP4A3O75365 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.2■□□□□ 0.98
PTP4A3O75365 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTP4A3O75365 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTP4A3O75365 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.19■□□□□ 0.98
PTP4A3O75365 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.19■□□□□ 0.98
PTP4A3O75365 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTP4A3O75365 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PTP4A3O75365 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms