Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.29■■■□□ 2.44
ABCC4O15439 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
ABCC4O15439 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.29■■■□□ 2.44
ABCC4O15439 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ABCC4O15439 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
ABCC4O15439 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ABCC4O15439 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.28■■■□□ 2.44
ABCC4O15439 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
ABCC4O15439 RPS2P7-201ENST00000447334 885 ntBASIC30.28■■■□□ 2.44
ABCC4O15439 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.27■■■□□ 2.44
ABCC4O15439 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
ABCC4O15439 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
ABCC4O15439 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
ABCC4O15439 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.44
ABCC4O15439 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.26■■■□□ 2.43
ABCC4O15439 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ABCC4O15439 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ABCC4O15439 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
ABCC4O15439 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.25■■■□□ 2.43
ABCC4O15439 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCC4O15439 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCC4O15439 LONRF2P2-201ENST00000439212 571 ntBASIC30.25■■■□□ 2.43
ABCC4O15439 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCC4O15439 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
ABCC4O15439 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
ABCC4O15439 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
ABCC4O15439 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCC4O15439 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCC4O15439 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCC4O15439 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCC4O15439 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
ABCC4O15439 MTURN-203ENST00000409688 843 ntTSL 2 BASIC30.24■■■□□ 2.43
ABCC4O15439 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.24■■■□□ 2.43
ABCC4O15439 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC30.24■■■□□ 2.43
ABCC4O15439 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
ABCC4O15439 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
ABCC4O15439 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
ABCC4O15439 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.23■■■□□ 2.43
ABCC4O15439 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.23■■■□□ 2.43
ABCC4O15439 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
ABCC4O15439 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
ABCC4O15439 AL356441.2-201ENST00000443009 864 ntBASIC30.22■■■□□ 2.43
ABCC4O15439 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
ABCC4O15439 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ABCC4O15439 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ABCC4O15439 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.22■■■□□ 2.43
ABCC4O15439 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ABCC4O15439 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.22■■■□□ 2.43
ABCC4O15439 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.22■■■□□ 2.43
ABCC4O15439 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ABCC4O15439 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.21■■■□□ 2.43
ABCC4O15439 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ABCC4O15439 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.21■■■□□ 2.43
ABCC4O15439 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
ABCC4O15439 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
ABCC4O15439 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
ABCC4O15439 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.2■■■□□ 2.42
ABCC4O15439 KRT18P10-201ENST00000388836 1287 ntBASIC30.2■■■□□ 2.42
ABCC4O15439 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
ABCC4O15439 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
ABCC4O15439 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.19■■■□□ 2.42
ABCC4O15439 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ABCC4O15439 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCC4O15439 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
ABCC4O15439 AC239859.2-201ENST00000444165 318 ntBASIC30.18■■■□□ 2.42
ABCC4O15439 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.18■■■□□ 2.42
ABCC4O15439 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
ABCC4O15439 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCC4O15439 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCC4O15439 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.17■■■□□ 2.42
ABCC4O15439 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.17■■■□□ 2.42
ABCC4O15439 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
ABCC4O15439 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ABCC4O15439 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ABCC4O15439 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ABCC4O15439 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
ABCC4O15439 SLC6A10P-202ENST00000431994 2058 ntBASIC30.14■■■□□ 2.42
ABCC4O15439 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
ABCC4O15439 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.14■■■□□ 2.42
ABCC4O15439 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.14■■■□□ 2.42
ABCC4O15439 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.14■■■□□ 2.42
ABCC4O15439 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
ABCC4O15439 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.41
ABCC4O15439 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
ABCC4O15439 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ABCC4O15439 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
ABCC4O15439 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.13■■■□□ 2.41
ABCC4O15439 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ABCC4O15439 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC30.13■■■□□ 2.41
ABCC4O15439 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.13■■■□□ 2.41
ABCC4O15439 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ABCC4O15439 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.12■■■□□ 2.41
ABCC4O15439 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ABCC4O15439 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.12■■■□□ 2.41
ABCC4O15439 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ABCC4O15439 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
ABCC4O15439 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ABCC4O15439 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ABCC4O15439 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
ABCC4O15439 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms