Protein–RNA interactions for Protein: F8VQ07

5830473C10Rik, RIKEN cDNA 5830473C10 gene, mousemouse

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5830473C10RikF8VQ07 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
5830473C10RikF8VQ07 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
5830473C10RikF8VQ07 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.67■□□□□ 0.9
5830473C10RikF8VQ07 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
5830473C10RikF8VQ07 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
5830473C10RikF8VQ07 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.67■□□□□ 0.9
5830473C10RikF8VQ07 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
5830473C10RikF8VQ07 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
5830473C10RikF8VQ07 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
5830473C10RikF8VQ07 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
5830473C10RikF8VQ07 Gm12922-201ENSMUST00000120626 809 ntBASIC20.66■□□□□ 0.9
5830473C10RikF8VQ07 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.66■□□□□ 0.9
5830473C10RikF8VQ07 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
5830473C10RikF8VQ07 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
5830473C10RikF8VQ07 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
5830473C10RikF8VQ07 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
5830473C10RikF8VQ07 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.66■□□□□ 0.9
5830473C10RikF8VQ07 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
5830473C10RikF8VQ07 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.65■□□□□ 0.9
5830473C10RikF8VQ07 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
5830473C10RikF8VQ07 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.65■□□□□ 0.9
5830473C10RikF8VQ07 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.65■□□□□ 0.9
5830473C10RikF8VQ07 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.65■□□□□ 0.9
5830473C10RikF8VQ07 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.65■□□□□ 0.9
5830473C10RikF8VQ07 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
5830473C10RikF8VQ07 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
5830473C10RikF8VQ07 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
5830473C10RikF8VQ07 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
5830473C10RikF8VQ07 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
5830473C10RikF8VQ07 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
5830473C10RikF8VQ07 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.64■□□□□ 0.89
5830473C10RikF8VQ07 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
5830473C10RikF8VQ07 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
5830473C10RikF8VQ07 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
5830473C10RikF8VQ07 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
5830473C10RikF8VQ07 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.63■□□□□ 0.89
5830473C10RikF8VQ07 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
5830473C10RikF8VQ07 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
5830473C10RikF8VQ07 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.63■□□□□ 0.89
5830473C10RikF8VQ07 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.63■□□□□ 0.89
5830473C10RikF8VQ07 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
5830473C10RikF8VQ07 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
5830473C10RikF8VQ07 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.63■□□□□ 0.89
5830473C10RikF8VQ07 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.62■□□□□ 0.89
5830473C10RikF8VQ07 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
5830473C10RikF8VQ07 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.62■□□□□ 0.89
5830473C10RikF8VQ07 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
5830473C10RikF8VQ07 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
5830473C10RikF8VQ07 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.61■□□□□ 0.89
5830473C10RikF8VQ07 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
5830473C10RikF8VQ07 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
5830473C10RikF8VQ07 Gm12821-201ENSMUST00000120022 600 ntBASIC20.61■□□□□ 0.89
5830473C10RikF8VQ07 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
5830473C10RikF8VQ07 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
5830473C10RikF8VQ07 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.61■□□□□ 0.89
5830473C10RikF8VQ07 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
5830473C10RikF8VQ07 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
5830473C10RikF8VQ07 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
5830473C10RikF8VQ07 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
5830473C10RikF8VQ07 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
5830473C10RikF8VQ07 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
5830473C10RikF8VQ07 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.6■□□□□ 0.89
5830473C10RikF8VQ07 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
5830473C10RikF8VQ07 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
5830473C10RikF8VQ07 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
5830473C10RikF8VQ07 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
5830473C10RikF8VQ07 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
5830473C10RikF8VQ07 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
5830473C10RikF8VQ07 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
5830473C10RikF8VQ07 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.58■□□□□ 0.89
5830473C10RikF8VQ07 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
5830473C10RikF8VQ07 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.58■□□□□ 0.89
5830473C10RikF8VQ07 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
5830473C10RikF8VQ07 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
5830473C10RikF8VQ07 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.57■□□□□ 0.88
5830473C10RikF8VQ07 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
5830473C10RikF8VQ07 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.57■□□□□ 0.88
5830473C10RikF8VQ07 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
5830473C10RikF8VQ07 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
5830473C10RikF8VQ07 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
5830473C10RikF8VQ07 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
5830473C10RikF8VQ07 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
5830473C10RikF8VQ07 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5830473C10RikF8VQ07 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
5830473C10RikF8VQ07 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5830473C10RikF8VQ07 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
5830473C10RikF8VQ07 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5830473C10RikF8VQ07 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5830473C10RikF8VQ07 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5830473C10RikF8VQ07 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
5830473C10RikF8VQ07 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
5830473C10RikF8VQ07 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
5830473C10RikF8VQ07 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
5830473C10RikF8VQ07 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
5830473C10RikF8VQ07 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
5830473C10RikF8VQ07 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.55■□□□□ 0.88
5830473C10RikF8VQ07 Gm27454-201ENSMUST00000185090 204 ntBASIC20.55■□□□□ 0.88
5830473C10RikF8VQ07 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
5830473C10RikF8VQ07 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
5830473C10RikF8VQ07 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms