Protein–RNA interactions for Protein: D3Z5W0

Atp6ap1l, ATPase, H+-transporting, lysosomal accessory protein 1-like, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1lD3Z5W0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Atp6ap1lD3Z5W0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atp6ap1lD3Z5W0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atp6ap1lD3Z5W0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atp6ap1lD3Z5W0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atp6ap1lD3Z5W0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.11■□□□□ 0.97
Atp6ap1lD3Z5W0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Atp6ap1lD3Z5W0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atp6ap1lD3Z5W0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.11■□□□□ 0.97
Atp6ap1lD3Z5W0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atp6ap1lD3Z5W0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atp6ap1lD3Z5W0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp6ap1lD3Z5W0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp6ap1lD3Z5W0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp6ap1lD3Z5W0 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.1■□□□□ 0.97
Atp6ap1lD3Z5W0 Gm9959-201ENSMUST00000068277 390 ntBASIC21.1■□□□□ 0.97
Atp6ap1lD3Z5W0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.1■□□□□ 0.97
Atp6ap1lD3Z5W0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp6ap1lD3Z5W0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp6ap1lD3Z5W0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6ap1lD3Z5W0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6ap1lD3Z5W0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6ap1lD3Z5W0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.09■□□□□ 0.97
Atp6ap1lD3Z5W0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.09■□□□□ 0.97
Atp6ap1lD3Z5W0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6ap1lD3Z5W0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6ap1lD3Z5W0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6ap1lD3Z5W0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6ap1lD3Z5W0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6ap1lD3Z5W0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6ap1lD3Z5W0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6ap1lD3Z5W0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6ap1lD3Z5W0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Atp6ap1lD3Z5W0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.08■□□□□ 0.97
Atp6ap1lD3Z5W0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atp6ap1lD3Z5W0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Atp6ap1lD3Z5W0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp6ap1lD3Z5W0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp6ap1lD3Z5W0 Gm10399-202ENSMUST00000202768 748 ntBASIC21.07■□□□□ 0.96
Atp6ap1lD3Z5W0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Atp6ap1lD3Z5W0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.07■□□□□ 0.96
Atp6ap1lD3Z5W0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp6ap1lD3Z5W0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Atp6ap1lD3Z5W0 Etf1-202ENSMUST00000180351 108 ntBASIC21.06■□□□□ 0.96
Atp6ap1lD3Z5W0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.06■□□□□ 0.96
Atp6ap1lD3Z5W0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.06■□□□□ 0.96
Atp6ap1lD3Z5W0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Atp6ap1lD3Z5W0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Atp6ap1lD3Z5W0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6ap1lD3Z5W0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6ap1lD3Z5W0 Gm14117-201ENSMUST00000122417 843 ntBASIC21.05■□□□□ 0.96
Atp6ap1lD3Z5W0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.05■□□□□ 0.96
Atp6ap1lD3Z5W0 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.05■□□□□ 0.96
Atp6ap1lD3Z5W0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6ap1lD3Z5W0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6ap1lD3Z5W0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6ap1lD3Z5W0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Atp6ap1lD3Z5W0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atp6ap1lD3Z5W0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.04■□□□□ 0.96
Atp6ap1lD3Z5W0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.04■□□□□ 0.96
Atp6ap1lD3Z5W0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atp6ap1lD3Z5W0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atp6ap1lD3Z5W0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atp6ap1lD3Z5W0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atp6ap1lD3Z5W0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atp6ap1lD3Z5W0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atp6ap1lD3Z5W0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Atp6ap1lD3Z5W0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atp6ap1lD3Z5W0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atp6ap1lD3Z5W0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Atp6ap1lD3Z5W0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Atp6ap1lD3Z5W0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Atp6ap1lD3Z5W0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atp6ap1lD3Z5W0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.02■□□□□ 0.96
Atp6ap1lD3Z5W0 Gm40881-201ENSMUST00000223397 166 ntBASIC21.02■□□□□ 0.96
Atp6ap1lD3Z5W0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.02■□□□□ 0.96
Atp6ap1lD3Z5W0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Atp6ap1lD3Z5W0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atp6ap1lD3Z5W0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.02■□□□□ 0.96
Atp6ap1lD3Z5W0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atp6ap1lD3Z5W0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atp6ap1lD3Z5W0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Atp6ap1lD3Z5W0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Atp6ap1lD3Z5W0 Gm7417-201ENSMUST00000192950 473 ntBASIC21.01■□□□□ 0.95
Atp6ap1lD3Z5W0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atp6ap1lD3Z5W0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Atp6ap1lD3Z5W0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Atp6ap1lD3Z5W0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.99■□□□□ 0.95
Atp6ap1lD3Z5W0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Atp6ap1lD3Z5W0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Atp6ap1lD3Z5W0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.98■□□□□ 0.95
Atp6ap1lD3Z5W0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6ap1lD3Z5W0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6ap1lD3Z5W0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6ap1lD3Z5W0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.97■□□□□ 0.95
Atp6ap1lD3Z5W0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6ap1lD3Z5W0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Atp6ap1lD3Z5W0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6ap1lD3Z5W0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Atp6ap1lD3Z5W0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms