Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Hfm1D3Z4R1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Hfm1D3Z4R1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Hfm1D3Z4R1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Hfm1D3Z4R1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Hfm1D3Z4R1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Hfm1D3Z4R1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
Hfm1D3Z4R1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Hfm1D3Z4R1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Hfm1D3Z4R1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Hfm1D3Z4R1 Gm42699-201ENSMUST00000198104 1657 ntBASIC30.78■■■□□ 2.52
Hfm1D3Z4R1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Hfm1D3Z4R1 Gm9207-201ENSMUST00000198773 1115 ntBASIC30.77■■■□□ 2.52
Hfm1D3Z4R1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
Hfm1D3Z4R1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
Hfm1D3Z4R1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Hfm1D3Z4R1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Hfm1D3Z4R1 Gm6139-201ENSMUST00000079261 882 ntBASIC30.75■■■□□ 2.51
Hfm1D3Z4R1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
Hfm1D3Z4R1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC30.74■■■□□ 2.51
Hfm1D3Z4R1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Hfm1D3Z4R1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Hfm1D3Z4R1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Hfm1D3Z4R1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC30.74■■■□□ 2.51
Hfm1D3Z4R1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Hfm1D3Z4R1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC30.74■■■□□ 2.51
Hfm1D3Z4R1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Hfm1D3Z4R1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Hfm1D3Z4R1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC30.74■■■□□ 2.51
Hfm1D3Z4R1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC30.73■■■□□ 2.51
Hfm1D3Z4R1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Hfm1D3Z4R1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Hfm1D3Z4R1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Hfm1D3Z4R1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Hfm1D3Z4R1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC30.73■■■□□ 2.51
Hfm1D3Z4R1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Hfm1D3Z4R1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Hfm1D3Z4R1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Hfm1D3Z4R1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Hfm1D3Z4R1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC30.72■■■□□ 2.51
Hfm1D3Z4R1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
Hfm1D3Z4R1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC30.71■■■□□ 2.51
Hfm1D3Z4R1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Hfm1D3Z4R1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
Hfm1D3Z4R1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC30.7■■■□□ 2.51
Hfm1D3Z4R1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC30.69■■■□□ 2.5
Hfm1D3Z4R1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Hfm1D3Z4R1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
Hfm1D3Z4R1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC30.68■■■□□ 2.5
Hfm1D3Z4R1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Hfm1D3Z4R1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Hfm1D3Z4R1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Hfm1D3Z4R1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
Hfm1D3Z4R1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Hfm1D3Z4R1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Hfm1D3Z4R1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Hfm1D3Z4R1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Hfm1D3Z4R1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Hfm1D3Z4R1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Hfm1D3Z4R1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
Hfm1D3Z4R1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Hfm1D3Z4R1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Hfm1D3Z4R1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.49
Hfm1D3Z4R1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
Hfm1D3Z4R1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Hfm1D3Z4R1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Hfm1D3Z4R1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
Hfm1D3Z4R1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Hfm1D3Z4R1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Hfm1D3Z4R1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Hfm1D3Z4R1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
Hfm1D3Z4R1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Hfm1D3Z4R1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Hfm1D3Z4R1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC30.61■■■□□ 2.49
Hfm1D3Z4R1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Hfm1D3Z4R1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Hfm1D3Z4R1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Hfm1D3Z4R1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC30.6■■■□□ 2.49
Hfm1D3Z4R1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Hfm1D3Z4R1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC30.6■■■□□ 2.49
Hfm1D3Z4R1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Hfm1D3Z4R1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Hfm1D3Z4R1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Hfm1D3Z4R1 Gm21168-201ENSMUST00000199646 1096 ntBASIC30.59■■■□□ 2.49
Hfm1D3Z4R1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC30.59■■■□□ 2.49
Hfm1D3Z4R1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Hfm1D3Z4R1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Hfm1D3Z4R1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC30.58■■■□□ 2.49
Hfm1D3Z4R1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Hfm1D3Z4R1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
Hfm1D3Z4R1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Hfm1D3Z4R1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
Hfm1D3Z4R1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC30.56■■■□□ 2.48
Hfm1D3Z4R1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC30.56■■■□□ 2.48
Hfm1D3Z4R1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Hfm1D3Z4R1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Hfm1D3Z4R1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Hfm1D3Z4R1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC30.56■■■□□ 2.48
Hfm1D3Z4R1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Hfm1D3Z4R1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms