Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm4950D3YUM8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm4950D3YUM8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm4950D3YUM8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm4950D3YUM8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Gm4950D3YUM8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm4950D3YUM8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm4950D3YUM8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.17■□□□□ 0.5
Gm4950D3YUM8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.17■□□□□ 0.5
Gm4950D3YUM8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm4950D3YUM8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm4950D3YUM8 Gm14523-201ENSMUST00000117260 558 ntBASIC18.16■□□□□ 0.5
Gm4950D3YUM8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Gm4950D3YUM8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Gm4950D3YUM8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm4950D3YUM8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Gm4950D3YUM8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm4950D3YUM8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm4950D3YUM8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm4950D3YUM8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm4950D3YUM8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.15■□□□□ 0.5
Gm4950D3YUM8 Mir6538-201ENSMUST00000183713 110 ntBASIC18.15■□□□□ 0.5
Gm4950D3YUM8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm4950D3YUM8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Gm4950D3YUM8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.15■□□□□ 0.5
Gm4950D3YUM8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm4950D3YUM8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm4950D3YUM8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm4950D3YUM8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm4950D3YUM8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm4950D3YUM8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.14■□□□□ 0.49
Gm4950D3YUM8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm4950D3YUM8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Gm4950D3YUM8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.14■□□□□ 0.49
Gm4950D3YUM8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm4950D3YUM8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm4950D3YUM8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm4950D3YUM8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm4950D3YUM8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm4950D3YUM8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.13■□□□□ 0.49
Gm4950D3YUM8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm4950D3YUM8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm4950D3YUM8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm4950D3YUM8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm4950D3YUM8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Gm4950D3YUM8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Gm7332-201ENSMUST00000118351 454 ntBASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm4950D3YUM8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm4950D3YUM8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Gm4950D3YUM8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm4950D3YUM8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.11■□□□□ 0.49
Gm4950D3YUM8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm4950D3YUM8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm4950D3YUM8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm4950D3YUM8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm4950D3YUM8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm4950D3YUM8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm4950D3YUM8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm4950D3YUM8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.11■□□□□ 0.49
Gm4950D3YUM8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm4950D3YUM8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Gm4950D3YUM8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm4950D3YUM8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm4950D3YUM8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm4950D3YUM8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Gm4950D3YUM8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Gm4950D3YUM8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm4950D3YUM8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm4950D3YUM8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm4950D3YUM8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Gm4950D3YUM8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.09■□□□□ 0.49
Gm4950D3YUM8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.09■□□□□ 0.49
Gm4950D3YUM8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm4950D3YUM8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Gm4950D3YUM8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm4950D3YUM8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Gm4950D3YUM8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm4950D3YUM8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Gm4950D3YUM8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Gm4950D3YUM8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm4950D3YUM8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm4950D3YUM8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm4950D3YUM8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm4950D3YUM8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm4950D3YUM8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm4950D3YUM8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms